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Sample GSM480900 Query DataSets for GSM480900
Status Public on Jun 08, 2014
Title Patient 6_OSCC
Sample type RNA
 
Source name OSCC
Organism Homo sapiens
Characteristics gender: Male
age: 59
Extracted molecule total RNA
Extraction protocol Total RNA was prepared from tissue using mirVana miRNA Isolation Kit (Ambion Inc.) in compliance with the manufacturer's protocol.
Label biotin
Label protocol Biotinylated cRNA were prepared with the Ambion MessageAmp kit for Illumina arrays
 
Hybridization protocol Standard Illumina hybridization protocol
Scan protocol Hybridization signals were detected and quantified using Illumina scanner and BeadStudio version 3.2.7.
Description 1002B
Data processing The data were normalised using quantile normalisation with IlluminaGUI in R
 
Submission date Dec 08, 2009
Last update date Oct 04, 2023
Contact name Patricia Severino
E-mail(s) patricia.severino@einstein.br
Phone 5511984661282
Organization name Hospital Israelita Albert Einstein
Department Albert Einstein Research and Education Institute
Street address Rua Comendador Elias Jafet, 755
City Sao Paulo
State/province Sao Paulo
ZIP/Postal code 05653-000
Country Brazil
 
Platform ID GPL9770
Series (1)
GSE31277 MicroRNA expression profile in Head and Neck Cancer: HOX-cluster embedded microRNA-196 and microRNA-10b dysregulation is implicated in cell proliferation

Data table header descriptions
ID_REF
VALUE Quantile normalized

Data table
ID_REF VALUE
HS_1 8.165823974
HS_10 8.609187584
HS_100 14.99541442
HS_101 7.989833565
HS_104 8.244014985
HS_107 8.282186816
HS_108.1 9.465780774
HS_109 8.309873183
HS_11.1 8.141051752
HS_110 9.007090356
HS_111 8.537397596
HS_112 8.07219106
HS_113 10.59205287
HS_114 8.757773916
HS_116 9.849198105
HS_117 8.516897187
HS_119 8.809756554
HS_120 8.631249888
HS_121 8.470068961
HS_122.1 8.904734583

Total number of rows: 739

Table truncated, full table size 16 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

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