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Sample GSM480917 Query DataSets for GSM480917
Status Public on Jun 08, 2014
Title Patient 15_OSCC
Sample type RNA
 
Source name OSCC
Organism Homo sapiens
Characteristics gender: Male
age: 51
Extracted molecule total RNA
Extraction protocol Total RNA was prepared from tissue using mirVana miRNA Isolation Kit (Ambion Inc.) in compliance with the manufacturer's protocol.
Label biotin
Label protocol Biotinylated cRNA were prepared with the Ambion MessageAmp kit for Illumina arrays
 
Hybridization protocol Standard Illumina hybridization protocol
Scan protocol Hybridization signals were detected and quantified using Illumina scanner and BeadStudio version 3.2.7.
Description 374B
Data processing The data were normalised using quantile normalisation with IlluminaGUI in R
 
Submission date Dec 08, 2009
Last update date Oct 04, 2023
Contact name Patricia Severino
E-mail(s) patricia.severino@einstein.br
Phone 5511984661282
Organization name Hospital Israelita Albert Einstein
Department Albert Einstein Research and Education Institute
Street address Rua Comendador Elias Jafet, 755
City Sao Paulo
State/province Sao Paulo
ZIP/Postal code 05653-000
Country Brazil
 
Platform ID GPL9770
Series (1)
GSE31277 MicroRNA expression profile in Head and Neck Cancer: HOX-cluster embedded microRNA-196 and microRNA-10b dysregulation is implicated in cell proliferation

Data table header descriptions
ID_REF
VALUE Quantile normalized

Data table
ID_REF VALUE
HS_1 8.315917337
HS_10 8.367953437
HS_100 15.30436759
HS_101 8.168568592
HS_104 9.857651504
HS_107 8.112358704
HS_108.1 14.29424505
HS_109 8.365279791
HS_11.1 8.160687705
HS_110 10.69831941
HS_111 8.888941091
HS_112 9.127612366
HS_113 9.979667808
HS_114 8.619951999
HS_116 10.34316599
HS_117 9.494572986
HS_119 8.743990678
HS_120 9.540678316
HS_121 8.077284628
HS_122.1 8.606187128

Total number of rows: 739

Table truncated, full table size 16 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

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