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Sample GSM484754 Query DataSets for GSM484754
Status Public on Dec 14, 2009
Title LuRKO d19 testis + 2.5mg testosterone - 2hB
Sample type RNA
 
Source name Testis, LH receptor knockout, 19 days post partum, treated with 2.5mg testosterone, response timecourse
Organism Mus musculus
Characteristics genotype/variation: LuRKO
tissue: testis
age post partum: 19 days + 2 hrs
testosterone dose: 2.5mg
time post testosterone injection: 2 hrs
Treatment protocol For the two rescue series, testosterone propionate was administered as a single intraperitoneal injection at 19 days post partum
Extracted molecule total RNA
Extraction protocol RNA was extracted with TRI reagent, followed by clean-up with QIAGEN RNeasy mini kit in accordance with the prescribed protocol provided with the kit. Quality control was performed with Agilent Bioanalyser.
Label biotin
Label protocol Biotinylated cRNA were prepared with the Ambion MessageAmp kit for Illumina arrays
 
Hybridization protocol Standard Illumina hybridization protocol
Scan protocol Standard Illumina scanning protocol
Description no additional information
Data processing The data were normalised using quantile normalisation with BeadStudio
 
Submission date Dec 14, 2009
Last update date Dec 14, 2009
Contact name Peter James Ellis
E-mail(s) p.j.i.ellis@kent.ac.uk
Phone 07808167834
Organization name University of Kent
Department School of Biosciences
Street address Stacey Building
City Canterbury
State/province Kent
ZIP/Postal code CT2 7NJ
Country United Kingdom
 
Platform ID GPL6887
Series (1)
GSE19453 Transcriptional profiling of luteinising hormone receptor deficient mice before and after testosterone treatment

Data table header descriptions
ID_REF
VALUE quantile normalized signal intensity
Detection Pval

Data table
ID_REF VALUE Detection Pval
ILMN_1212602 171.0388 0
ILMN_1212603 58.43024 0.9864865
ILMN_1212605 530.369 0
ILMN_1212607 85.06134 0.2657658
ILMN_1212612 90.03127 0.1858108
ILMN_1212614 54.21365 0.9988739
ILMN_1212619 165.5256 0
ILMN_1212623 90.24162 0.1813063
ILMN_1212625 1118.158 0
ILMN_1212626 234.3354 0
ILMN_1212628 72.85342 0.6441441
ILMN_1212632 148.2472 0
ILMN_1212633 197.3252 0
ILMN_1212636 9491.762 0
ILMN_1212637 895.3526 0
ILMN_1212638 15959.97 0
ILMN_1212639 160.4208 0
ILMN_1212644 87.49 0.222973
ILMN_1212645 110.878 0.01463964
ILMN_1212646 3421.671 0

Total number of rows: 45281

Table truncated, full table size 1244 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

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