|
Status |
Public on Jan 01, 2010 |
Title |
WI-38 cells, at 24 h after exposure to 0.5 uM BPDE, biological rep3 |
Sample type |
RNA |
|
|
Source name |
WI-38 cells exposed to 0.5 uM BPDE for 24 h
|
Organism |
Homo sapiens |
Characteristics |
cell type: Normal human diploid WI-38 lung fibroblasts, CCL-75(TM), passage 7-12.
|
Extracted molecule |
total RNA |
Extraction protocol |
Total cellular RNA was prepared using the RNeasy Mini Kit from (Qiagen), treated with TURBO DNA-freeTM (Ambion) and RNA integrity analyzed using Agilent Bioanalyzer 2100.
|
Label |
biotin
|
Label protocol |
Standard Affymetrix Protocols
|
|
|
Hybridization protocol |
Standard Affymetrix Protocols
|
Scan protocol |
The microarrays were scanned using a GeneChip® Scanner 3000 (Affymetrix) and subsequent image analysis was performed using Affymetrix GCOS software using standard Affymetrix protocols.
|
Description |
Gene expression data from WI-38 cells exposed to DMSO vehicle control
|
Data processing |
The resulting .cel files were normalized with the robust multichip average (RMA) method.
|
|
|
Submission date |
Dec 16, 2009 |
Last update date |
Aug 28, 2018 |
Contact name |
Kristian Dreij |
E-mail(s) |
kristian.dreij@ki.se
|
Organization name |
Karolinska Institutet
|
Department |
Environmental Medicine
|
Street address |
Nobels väg 13
|
City |
Stockholm |
ZIP/Postal code |
17177 |
Country |
Sweden |
|
|
Platform ID |
GPL570 |
Series (1) |
GSE19510 |
Transcriptional response of normal human lung WI-38 fibroblasts to benzo[a]pyrene diol epoxide: a dose-response study |
|
Relations |
Reanalyzed by |
GSE86362 |
Reanalyzed by |
GSE119087 |