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Sample GSM490135 Query DataSets for GSM490135
Status Public on Dec 23, 2010
Title pooled blood tissues from four healthy women
Sample type RNA
 
Source name non-GDM blood tissue
Organism Homo sapiens
Characteristics tissue: blood
Extracted molecule total RNA
Extraction protocol Total RNA of whole blood was obtained using QIAamp RNA Blood Mini Kit (Qiagen) and digested with RNase-Free DNase (Promega) according to the manufacturer’s suggestions. Total RNA of the placenta tissue was obtained using the TRIzol reagent (Invitrogen) according to the manufacturer’s suggestions.
Label biotin
Label protocol Biotinylated cRNA were prepared with the Ambion MessageAmp kit for Illumina arrays by using 500ng total RNA
 
Hybridization protocol Standard Illumina hybridization protocol
Scan protocol Standard Illumina scanning protocol
Description n/a
Data processing The data were normalised using cubic spline method with Beadstudio software
 
Submission date Dec 24, 2009
Last update date Dec 23, 2010
Contact name Dapeng Wang
Organization name Beijing Institute of Genomics
Street address No.7 Beitucheng West Road, Chaoyang District, Beijing 100029, PR China
City Beijing
ZIP/Postal code 100029
Country China
 
Platform ID GPL7350
Series (1)
GSE19649 Genomic expression profiles of blood and placenta in Chinese women with gestational diabetes

Data table header descriptions
ID_REF
VALUE Cubic spline normalized
Detection Pval

Data table
ID_REF VALUE Detection Pval
ILMN_10000 153.2578 0.000727802
ILMN_100000 -0.3224278 0.4803493
ILMN_100007 -3.608153 0.6957787
ILMN_100009 3.667273 0.2561863
ILMN_10001 719.0063 0
ILMN_100010 6.738138 0.1513828
ILMN_10002 -6.348755 0.8653566
ILMN_100028 105.6533 0.002911208
ILMN_100030 0.3263435 0.4323144
ILMN_100031 5.073629 0.1943231
ILMN_100034 -7.02072 0.8915575
ILMN_100037 -0.9336739 0.5203785
ILMN_10004 16.63038 0.02474527
ILMN_10005 5.883322 0.1717613
ILMN_100054 -5.023128 0.7874818
ILMN_100059 7.557401 0.1259097
ILMN_10006 6.608719 0.1550218
ILMN_100075 -1.646511 0.56623
ILMN_100079 -9.697887 0.9606987
ILMN_100083 -2.066346 0.5975255

Total number of rows: 46713

Table truncated, full table size 1365 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

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