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Status
Public on Oct 01, 2005
Title
Udt1-1 anther and Wild type_anther_dye-swap_1
Sample type
RNA
Channel 1 Source name
Wild type_anther
Organism
Oryza sativa Extracted molecule
total RNA
Channel 2 Source name
Udt1-1 anther
Organism
Oryza sativa Extracted molecule
total RNA
Description
UDT1-1 anthers were prepared at anther from meiosis to young microspore and wild type anther were also prepared at anthers from meiosis to young microspore. Wild type anther was labeled with Cys5 and UDT1-1 anther was labeled with Cys3.
Submission date
May 04, 2005
Last update date
May 29, 2005
Contact name
Yeon-Ki Kim
E-mail(s)
kim750@ggbio.com Phone
82-31-330-6276
Fax
82-31-321-6355
Organization name
Genomics and Genetics Institute, GreenGene Biotech
Street address
38-2 Nam-dong
City
Yongin
State/province
Kyonggido
ZIP/Postal code
449–728
Country
South Korea
Platform ID
GPL1829 Series (1)
GSE2619 Udt1-1 anther and Wild type_anther
Data table header descriptions ID_REF
VALUE Log ratios with base 2 were adjusted by block-by-block Lowess normalization
SPOT_ADDR Spot address. 2 chips/1 set, 12 X 4 blocks/1 chip, 26 X 26 spots/1 block
CH1_Median WT_A (F635) median fluorescence intensity
CH1_SD WT_A (F635) fluorescence intensity standard deviation
CH1_BKD_Median WT_A (F635) background median fluorescence intensity
CH1_BKD_SD WT_A (F635) background fluorescence intensity standard deviation
CH2_Median UDT1-1 (F532) median fluorescence intensity
CH2_SD UDT1-1 (F532) fluorescence intensity standard deviation
CH2_BKD_Median
CH2_BKD_SD
Flags Spot quality (50 and 0, good; -50 and -100, bad)
Data table ID_REF VALUE SPOT_ADDR CH1_Median CH1_SD CH1_BKD_Median CH1_BKD_SD CH2_Median CH2_SD CH2_BKD_Median CH2_BKD_SD Flags Os000099_01
0.311
A01010101
6713
2220
692
440
4544
1929
1661
752
0
Os000105_01
-0.062
A01010102
1353
1101
706
459
1974
1214
1588
754
0
Os000123_01
-0.510
A01010103
501
437
708
489
1553
740
1648
806
-50
Os000129_01
-0.245
A01010104
4137
1604
685
472
4406
1722
1670
735
0
Os000147_01
-0.570
A01010105
13915
3044
680
466
15555
2396
1653
766
0
Os000153_01
-0.176
A01010106
5118
1763
676
458
4949
1971
1730
1657
0
Os000171_01
-0.076
A01010107
7556
2889
724
468
6387
2319
1719
1463
0
Os000177_01
-0.310
A01010108
694
604
699
471
1639
3471
1674
929
-50
Os000473_01
1.169
A01010109
25871
5930
676
535
8657
3192
1841
4324
0
Os000479_01
-0.155
A01010110
2827
1180
690
1187
3191
1235
1824
3636
0
Os000497_01
-0.525
A01010111
2117
1365
654
466
3249
1480
1856
847
0
Os000502_01
-0.639
A01010112
32178
6397
708
1488
39734
7177
1955
13181
0
Os000520_01
-0.887
A01010113
1346
799
631
1415
3034
6047
1976
11986
-50
Os000526_01
-1.449
A01010114
17508
4245
627
435
36587
7415
1796
2157
0
Os000543_01
-0.667
A01010115
19503
4524
639
522
23238
4215
1787
4535
0
Os000549_01
0.007
A01010116
10031
3885
661
450
7744
12690
1794
1746
0
Os000842_01
-0.146
A01010117
4624
1862
688
466
4498
1765
1728
986
0
Os000848_01
-0.927
A01010118
10944
2637
678
469
15762
3852
1765
2147
0
Os000865_01
-0.124
A01010119
2715
1126
683
519
3047
1300
1760
3912
0
Os000871_01
-0.248
A01010120
65535
22253
621
573
65535
22515
1797
2805
0
60727 4073 Kbytes .Supplementary data files not provided
