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Status
Public on Oct 01, 2005
Title
Wild type_anther at meiosis and Wild type Palea/lemma
Sample type
RNA
Channel 1 Source name
Wild type anther at meiosis
Organism
Oryza sativa Extracted molecule
total RNA
Channel 2 Source name
Wild type_Palea/lemma
Organism
Oryza sativa Extracted molecule
total RNA
Description
Wild type_Palea/lemmas in the flowering stage were prepared and wild type anther were also prepared in the anthers at meiosis. Wild type anther at meiosis was labeled with Cys5 and wild type_Palea/lemma was labeled with Cys3.
Submission date
May 04, 2005
Last update date
May 29, 2005
Contact name
Yeon-Ki Kim
E-mail(s)
kim750@ggbio.com Phone
82-31-330-6276
Fax
82-31-321-6355
Organization name
Genomics and Genetics Institute, GreenGene Biotech
Street address
38-2 Nam-dong
City
Yongin
State/province
Kyonggido
ZIP/Postal code
449–728
Country
South Korea
Platform ID
GPL1829 Series (1)
GSE2619 Udt1-1 anther and Wild type_anther
Data table header descriptions ID_REF
VALUE Log ratios with base 2 were adjusted by block-by-block Lowess normalization
SPOT_ADDR Spot address. 2 chips/1 set, 12 X 4 blocks/1 chip, 26 X 26 spots/1 block
CH1_Median M (F635) median fluorescence intensity
CH1_SD M (F635) fluorescence intensity standard deviation
CH1_BKD_Median
CH1_BKD_SD
CH2_Median PL (F532) median fluorescence intensity
CH2_SD PL (F532) fluorescence intensity standard deviation
CH2_BKD_Median PL (F532) background median fluorescence intensity
CH2_BKD_SD PL (F532) background fluorescence intensity standard deviation
Flags Spot quality (50 and 0, good; -50 and -100, bad)
Data table ID_REF VALUE SPOT_ADDR CH1_Median CH1_SD CH1_BKD_Median CH1_BKD_SD CH2_Median CH2_SD CH2_BKD_Median CH2_BKD_SD Flags Os000099_01
0.342
A01010101
4084
1520
291
210
3559
1313
550
250
0
Os000105_01
-0.025
A01010102
1859
916
296
248
2210
888
536
221
0
Os000123_01
0.337
A01010103
2073
853
300
222
1926
698
527
210
0
Os000129_01
-0.602
A01010104
3424
1213
314
201
5694
1800
535
207
0
Os000147_01
-0.045
A01010105
10855
2927
314
217
11772
2777
534
235
0
Os000153_01
-0.342
A01010106
4394
1588
298
559
6012
2481
545
5236
0
Os000171_01
0.229
A01010107
6492
2410
326
1024
5903
1728
555
8365
0
Os000177_01
0.181
A01010108
311
161
289
231
555
199
536
246
-50
Os000473_01
0.980
A01010109
15639
3417
262
236
8334
2015
524
250
0
Os000479_01
-0.160
A01010110
1377
586
271
251
1921
865
502
207
0
Os000497_01
-0.669
A01010111
1759
1394
275
207
3160
12169
508
375
0
Os000502_01
-0.358
A01010112
20253
4213
300
944
26671
3673
537
311
0
Os000520_01
-0.227
A01010113
1136
520
286
658
1750
778
523
415
0
Os000526_01
-1.313
A01010114
7388
3826
289
3268
19251
15565
533
14488
0
Os000543_01
-0.642
A01010115
7500
6537
282
2173
12306
24225
532
8495
0
Os000549_01
0.253
A01010116
4586
1457
290
1581
4217
4304
531
4954
0
Os000842_01
-0.914
A01010117
2611
1096
269
249
5433
4768
547
460
0
Os000848_01
-0.695
A01010118
4117
1325
265
217
7157
2268
550
226
0
Os000865_01
-0.188
A01010119
1371
844
279
218
1947
3386
528
342
0
Os000871_01
0.111
A01010120
62227
13493
282
211
57828
8482
536
237
0
60727 3944 Kbytes .Supplementary data files not provided
