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Status
Public on Oct 01, 2005
Title
Wild type_anther at meiosis and Wild type Palea/lemma_dye-swap
Sample type
RNA
Channel 1 Source name
Wild type_Palea/lemma
Organism
Oryza sativa Extracted molecule
total RNA
Channel 2 Source name
Wild type anther at meiosis
Organism
Oryza sativa Extracted molecule
total RNA
Description
Wild type_Palea/lemmas in the flowering stage were prepared and wild type anther were also prepared in the anthers at meiosis. Wild type Palea/lemma was labeled with Cys5 and wild type anther was labeled with Cys3.
Submission date
May 04, 2005
Last update date
May 29, 2005
Contact name
Yeon-Ki Kim
E-mail(s)
kim750@ggbio.com Phone
82-31-330-6276
Fax
82-31-321-6355
Organization name
Genomics and Genetics Institute, GreenGene Biotech
Street address
38-2 Nam-dong
City
Yongin
State/province
Kyonggido
ZIP/Postal code
449–728
Country
South Korea
Platform ID
GPL1829 Series (1)
GSE2619 Udt1-1 anther and Wild type_anther
Data table header descriptions ID_REF
VALUE Log ratios with base 2 were adjusted by block-by-block Lowess normalization
SPOT_ADDR Spot address. 2 chips/1 set, 12 X 4 blocks/1 chip, 26 X 26 spots/1 block
CH1_Median PL (F635) median fluorescence intensity
CH1_SD PL (F635) fluorescence intensity standard deviation
CH1_BKD_Median PL (F635) background median fluorescence intensity
CH1_BKD_SD PL (F635) background fluorescence intensity standard deviation
CH2_Median M (F532) median fluorescence intensity
CH2_SD M (F532) fluorescence intensity standard deviation
CH2_BKD_Median
CH2_BKD_SD
Flags Spot quality (50 and 0, good; -50 and -100, bad)
Data table ID_REF VALUE SPOT_ADDR CH1_Median CH1_SD CH1_BKD_Median CH1_BKD_SD CH2_Median CH2_SD CH2_BKD_Median CH2_BKD_SD Flags Os000099_01
0.080
A01010101
9030
4041
336
312
8308
3288
573
241
0
Os000105_01
-0.229
A01010102
2097
937
364
315
2431
827
558
288
0
Os000123_01
-0.453
A01010103
2420
1126
353
284
3214
1560
539
288
0
Os000129_01
0.407
A01010104
8251
2446
373
4271
5963
2077
571
7688
0
Os000147_01
-0.154
A01010105
13555
4636
415
2590
14316
5096
577
2843
0
Os000153_01
0.485
A01010106
7415
2314
396
1578
5038
1717
586
4798
0
Os000171_01
0.110
A01010107
8286
2561
400
580
7429
2447
592
3655
0
Os000177_01
-0.196
A01010108
391
178
485
6077
635
932
674
13214
-50
Os000473_01
-1.034
A01010109
10780
15639
451
4008
20833
14893
673
8329
0
Os000479_01
0.054
A01010110
1680
900
458
380
1661
726
696
751
0
Os000497_01
0.704
A01010111
3513
1583
671
1270
2098
973
820
7673
0
Os000502_01
-0.226
A01010112
23701
7359
721
3144
25341
8878
981
9071
0
Os000520_01
0.234
A01010113
2960
1255
639
828
2449
18744
867
900
0
Os000526_01
0.340
A01010114
19230
5026
659
1845
14243
4663
929
12758
0
Os000543_01
0.062
A01010115
29512
4465
470
1507
25868
4294
706
12048
0
Os000549_01
-0.464
A01010116
8168
3210
346
375
10985
3249
546
2711
0
Os000842_01
0.939
A01010117
11614
2425
373
2901
5879
2218
536
9708
0
Os000848_01
0.137
A01010118
14645
2840
382
622
12667
2796
535
1476
0
Os000865_01
0.140
A01010119
5330
1567
374
707
4584
1525
535
1596
0
Os000871_01
-0.121
A01010120
65535
14877
355
2032
65535
14609
537
3471
0
60727 3948 Kbytes .Supplementary data files not provided
