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Status
Public on Oct 01, 2005
Title
Wild type_anther at vacuolated pollen and wild type Palea/lemma_dye-swap
Sample type
RNA
Channel 1 Source name
Wild type Palea/lemma
Organism
Oryza sativa Extracted molecule
total RNA
Channel 2 Source name
Wild type anther at vacuolated pollen
Organism
Oryza sativa Extracted molecule
total RNA
Description
Wild type Palea/lemmas in the flowering stage were prepared and wild type anther were also prepared in the anthers at vacuolated pollen. Wild type Palea/lemma was labeled with Cys5 and wild type anther at vacuolated pollen was labeled with Cys3.
Submission date
May 04, 2005
Last update date
May 29, 2005
Contact name
Yeon-Ki Kim
E-mail(s)
kim750@ggbio.com Phone
82-31-330-6276
Fax
82-31-321-6355
Organization name
Genomics and Genetics Institute, GreenGene Biotech
Street address
38-2 Nam-dong
City
Yongin
State/province
Kyonggido
ZIP/Postal code
449–728
Country
South Korea
Platform ID
GPL1829 Series (1)
GSE2619 Udt1-1 anther and Wild type_anther
Data table header descriptions ID_REF
VALUE Log ratios with base 2 were adjusted by block-by-block Lowess normalization
SPOT_ADDR Spot address. 2 chips/1 set, 12 X 4 blocks/1 chip, 26 X 26 spots/1 block
CH1_Median PL (F635) median fluorescence intensity
CH1_SD PL (F635) fluorescence intensity standard deviation
CH1_BKD_Median PL (F635) background median fluorescence intensity
CH1_BKD_SD PL (F635) background fluorescence intensity standard deviation
CH2_Median V (F532) median fluorescence intensity
CH2_SD V (F532) fluorescence intensity standard deviation
CH2_BKD_Median
CH2_BKD_SD
Flags Spot quality (50 and 0, good; -50 and -100, bad)
Data table ID_REF VALUE SPOT_ADDR CH1_Median CH1_SD CH1_BKD_Median CH1_BKD_SD CH2_Median CH2_SD CH2_BKD_Median CH2_BKD_SD Flags Os000099_01
0.849
A01010101
17895
2974
235
272
7792
1621
854
331
0
Os000105_01
0.244
A01010102
3653
1178
246
235
2731
860
847
662
0
Os000123_01
-0.170
A01010103
4035
1208
262
198
3877
971
846
392
0
Os000129_01
0.032
A01010104
13685
2571
268
219
10504
1773
858
367
0
Os000147_01
-0.215
A01010105
22129
4312
261
967
19876
2701
847
3151
0
Os000153_01
0.389
A01010106
8112
1900
265
993
4950
1317
836
3245
0
Os000171_01
0.005
A01010107
12031
3034
269
488
9404
1822
850
2868
0
Os000177_01
-4.416
A01010108
1112
2352
272
234
19828
24482
845
1515
0
Os000473_01
-1.458
A01010109
16560
10319
284
3144
34781
17119
828
10335
0
Os000479_01
0.291
A01010110
5651
1577
268
3241
3861
6361
784
10560
0
Os000497_01
0.261
A01010111
3544
2963
264
576
2635
8947
814
7874
0
Os000502_01
-0.445
A01010112
37535
8146
283
3815
40074
4778
850
7532
0
Os000520_01
0.261
A01010113
3336
1134
280
4050
2504
823
809
6819
0
Os000526_01
0.046
A01010114
25910
3512
269
1131
19301
3630
822
5553
0
Os000543_01
0.025
A01010115
29542
6417
256
1091
22103
2623
796
2632
0
Os000549_01
-0.549
A01010116
9823
2522
255
297
11271
1990
805
3188
0
Os000842_01
0.722
A01010117
13376
2346
263
255
6370
5120
846
2989
0
Os000848_01
0.380
A01010118
16284
2890
295
493
9828
2684
827
5020
0
Os000865_01
0.146
A01010119
5074
1216
285
673
3862
975
856
7759
0
Os000871_01
-0.271
A01010120
65535
6059
262
587
64588
3072
832
6172
0
60727 3997 Kbytes .Supplementary data files not provided
