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Status
Public on Oct 01, 2005
Title
Wild type_anther at pollen mitosis and wild type Palea/lemma_dye-swap
Sample type
RNA
Channel 1 Source name
Wild type Palea/lemma
Organism
Oryza sativa Extracted molecule
total RNA
Channel 2 Source name
Wild type anther at pollen mitosis
Organism
Oryza sativa Extracted molecule
total RNA
Description
Wild type Palea/lemmas in the flowering stage were prepared and wild type anther were also prepared in the anthers at pollen mitosis. Wild type Palea/lemma was labeled with Cys5 and wild type anther at pollen mitosis was labeled with Cys3.
Submission date
May 04, 2005
Last update date
May 29, 2005
Contact name
Yeon-Ki Kim
E-mail(s)
kim750@ggbio.com Phone
82-31-330-6276
Fax
82-31-321-6355
Organization name
Genomics and Genetics Institute, GreenGene Biotech
Street address
38-2 Nam-dong
City
Yongin
State/province
Kyonggido
ZIP/Postal code
449–728
Country
South Korea
Platform ID
GPL1829 Series (1)
GSE2619 Udt1-1 anther and Wild type_anther
Data table header descriptions ID_REF
VALUE Log ratios with base 2 were adjusted by block-by-block Lowess normalization
SPOT_ADDR Spot address. 2 chips/1 set, 12 X 4 blocks/1 chip, 26 X 26 spots/1 block
CH1_Median PL (F635) median fluorescence intensity
CH1_SD PL (F635) fluorescence intensity standard deviation
CH1_BKD_Median PL (F635) background median fluorescence intensity
CH1_BKD_SD PL (F635) background fluorescence intensity standard deviation
CH2_Median P (F532) median fluorescence intensity
CH2_SD P (F532) fluorescence intensity standard deviation
CH2_BKD_Median
CH2_BKD_SD
Flags Spot quality (50 and 0, good; -50 and -100, bad)
Data table ID_REF VALUE SPOT_ADDR CH1_Median CH1_SD CH1_BKD_Median CH1_BKD_SD CH2_Median CH2_SD CH2_BKD_Median CH2_BKD_SD Flags Os000099_01
1.265
A01010101
11500
3670
221
202
4303
1908
1179
737
0
Os000105_01
0.324
A01010102
1995
787
206
191
1921
671
1119
631
0
Os000123_01
-0.173
A01010103
2917
1332
229
7856
3299
1195
1120
7692
0
Os000129_01
-0.153
A01010104
6283
2262
229
8244
6295
2197
1137
8070
0
Os000147_01
-0.638
A01010105
17242
3946
225
358
21676
4405
1108
625
0
Os000153_01
0.277
A01010106
5775
1509
220
342
4354
2291
1130
630
0
Os000171_01
-0.435
A01010107
6934
1843
224
312
8377
2913
1159
620
0
Os000177_01
-0.292
A01010108
243
259
216
241
1172
576
1172
1433
-50
Os000473_01
-1.413
A01010109
12274
4504
217
265
26559
10521
1148
655
0
Os000479_01
-0.132
A01010110
3194
2943
217
171
3461
15823
1097
1816
0
Os000497_01
-0.360
A01010111
1296
4677
229
240
2189
8830
1122
806
0
Os000502_01
0.437
A01010112
28935
6308
253
2828
17176
4094
1149
1053
0
Os000520_01
0.001
A01010113
2066
1059
248
923
2353
960
1179
3759
0
Os000526_01
-0.456
A01010114
15277
3520
242
1325
17275
3827
1182
3834
0
Os000543_01
0.256
A01010115
19999
4948
253
1063
13761
3130
1160
1348
0
Os000549_01
-0.734
A01010116
5849
3028
252
438
8736
11944
1184
1436
0
Os000842_01
0.628
A01010117
8484
2140
274
289
4951
1717
1350
1855
0
Os000848_01
1.115
A01010118
11606
2799
288
274
4797
1665
1266
2099
0
Os000865_01
0.315
A01010119
3779
1497
252
206
2997
1309
1231
1792
0
Os000871_01
-0.446
A01010120
51335
13165
264
217
60170
15927
1278
2950
0
60727 4027 Kbytes .Supplementary data files not provided
