|
| Status |
Public on Mar 24, 2021 |
| Title |
GA_affy_SNP of homo sapiens_blood [JX10-IP19D2302] |
| Sample type |
genomic |
| |
|
| Source name |
GA_affy_SNP of homo sapiens_blood
|
| Organism |
Homo sapiens |
| Characteristics |
genotype/variation: 11p11.12p12 duplication
tissue: blood
|
| Treatment protocol |
None
|
| Growth protocol |
None
|
| Extracted molecule |
genomic DNA |
| Extraction protocol |
Human genomic DNA was extracted from whole blood or amniotic fluid using a QIAamp DNA Mini Kit
|
| Label |
Biotin
|
| Label protocol |
As per manufacturer (Affymetrix)
|
| |
|
| Hybridization protocol |
DNA was restriction digested, PCR amplified, fragmented, labeled and hybridized to each array according to the manufacturer's instructions.
|
| Scan protocol |
The Arrays were then washed using Affymetrix fluidics stations, and scanned using the Gene Chip Scanner 3000.
|
| Data processing |
Affymetrix®Chromosome Analysis Suite (ChAS) Software for data visualization and analysis. As per manufacturer (Affymetrix).
primary data description: Genotype Call (SNP call): AA, AB, BB, NC, and NoCall; 'Signal' = Summarized signal
|
| |
|
| Submission date |
Mar 23, 2021 |
| Last update date |
Mar 24, 2021 |
| Contact name |
Xuejiao Chen |
| E-mail(s) |
chenxj@enzemed.com
|
| Organization name |
Taizhou Hospital of Zhejiang Province affiliated to Wenzhou Medical University
|
| Street address |
chichen
|
| City |
Linhai |
| ZIP/Postal code |
317000 |
| Country |
China |
| |
|
| Platform ID |
GPL18637 |
| Series (1) |
| GSE169469 |
11p11.12p12 duplication in a family with intellectual disability and craniofacial anomalies |
|
