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Sample GSM5368694 Query DataSets for GSM5368694
Status Public on Dec 31, 2022
Title GAS_125
Sample type genomic
 
Source name PBMC
Organism Homo sapiens
Characteristics alive: 1
Extracted molecule genomic DNA
Extraction protocol High-quality DNA from PBMCs was extracted
prepared using standard protocols (Bisulfite conversion Qiagen, hybridization, and Infinium Methylation Assay Illumina)
Label cy3,cy5
Label protocol Illumina protcol
 
Hybridization protocol Illumina protcol
Scan protocol Illumina protcol
Data processing R package minfi was used to transform the raw data
normalized and generate M value
hg19
 
Submission date Jun 10, 2021
Last update date Dec 31, 2022
Contact name Ivana Yang
E-mail(s) IVANA.YANG@CUANSCHUTZ.EDU
Organization name University of Colorado
Street address 1635 Aurora Ct
City Aurora
State/province CO
ZIP/Postal code 80045
Country USA
 
Platform ID GPL21145
Series (1)
GSE176529 Identification of Early and Intermediate Biomarkers for Acute respiratory distress syndrome (ARDS) Mortality by Multi-Omic Approaches

Data table header descriptions
ID_REF
VALUE normalized M Values for each sample

Data table
ID_REF VALUE
cg14817997 1.28183372424107
cg26928153 2.45562355107803
cg16269199 1.1017876946267
cg13869341 2.05050338977237
cg14008030 0.302238227211999
cg12045430 -0.965692077743228
cg20826792 -0.166744922911961
cg20253340 0.265438190962069
cg02404219 2.78961059753392
cg21870274 1.33929150372713
cg03130891 -3.50958059198457
cg04098293 1.27277732176953
cg16382250 2.31139156601717
cg24335620 2.04625314328904
cg22463138 1.50487099326273
cg16162899 3.05546195766697
cg01803908 1.79205465953476
cg17149495 1.64735656064079
cg22802167 2.87617047923498
cg24669183 2.18356126694254

Total number of rows: 814207

Table truncated, full table size 22572 Kbytes.




Supplementary file Size Download File type/resource
GSM5368694_GAS_125_Grn.idat.gz 7.1 Mb (ftp)(http) IDAT
GSM5368694_GAS_125_Red.idat.gz 7.1 Mb (ftp)(http) IDAT
Processed data included within Sample table
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