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Sample GSM5384901 Query DataSets for GSM5384901
Status Public on Apr 10, 2023
Title baseline_patient.39
Sample type RNA
 
Source name skin
Organism Homo sapiens
Characteristics visitid: 2
treatment: Ixekizumab 80mg Q2W
pasi: 15.6
patient_id: 39
time: Gene expression data at baseline.
tissue: skin
disease state: chronic plaque psoriasis
Treatment protocol subcutaneous injections of ixekizuma 80mg Q2W
Growth protocol not applicable
Extracted molecule total RNA
Extraction protocol standard Affymetrix protocols
Label biotin
Label protocol standard Affymetrix protocols
 
Hybridization protocol standard Affymetrix protocols
Scan protocol standard Affymetrix protocols
Data processing Raw signal intensites were normalized using the RMA algorithm implemented with R 3.5.2 and Bioconductor oligo library.
 
Submission date Jun 15, 2021
Last update date Apr 10, 2023
Contact name Scott Andrew Ochsner
E-mail(s) sochsner@bcm.edu
Phone 713-798-6227
Organization name Baylor College of Medicine
Department Molecular and Cellular Biology
Lab SPP: Signaling Pathways Project
Street address One Baylor Plaza
City Houston
State/province TX
ZIP/Postal code 77030
Country USA
 
Platform ID GPL17586
Series (1)
GSE178228 Ixekizumab treatment of patients with moderate-to-severe plaque psoriasis.

Data table header descriptions
ID_REF
VALUE RMA log2 normalized signal

Data table
ID_REF VALUE
2824546_st 12.23780855
2824549_st 11.86735796
2824551_st 11.66032279
2824554_st 11.83569158
2827992_st 11.05992346
2827995_st 10.6497864
2827996_st 10.6204932
2828010_st 9.297678655
2828012_st 9.664411186
2835442_st 9.345255006
2835447_st 7.930774314
2835453_st 8.437724644
2835456_st 11.74060111
2835459_st 9.88734949
2835461_st 8.217605012
2839509_st 10.49793407
2839511_st 8.249804738
2839513_st 10.11108518
2839515_st 8.982669259
2839517_st 10.67898124

Total number of rows: 70523

Table truncated, full table size 1930 Kbytes.




Supplementary file Size Download File type/resource
GSM5384901__52084400119447062620436783158714.CEL.gz 24.4 Mb (ftp)(http) CEL
Processed data included within Sample table

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