|
| Status |
Public on May 01, 2010 |
| Title |
Cardiac left ventricle_aorta ligated_6days_ rep1 |
| Sample type |
RNA |
| |
|
| Source name |
Cardiac left ventricle_6days
|
| Organism |
Rattus norvegicus |
| Characteristics |
strain: Wistar
sex: male
tissue: cardiac left ventricle
treatment: aorta ligated
|
| Treatment protocol |
Abdominal aorta was ligated to induce cardiac hypertrophy
|
| Extracted molecule |
total RNA |
| Extraction protocol |
Cardiac tissue was put in RNAlater and extracted using Qiagen RNeasy Fibrous Tissue Mini Kit for total RNA.
|
| Label |
Cy3
|
| Label protocol |
Illumina TotalPrep RNA Amplification Kit was used
|
| |
|
| Hybridization protocol |
Performed according to Illumina protocol
|
| Scan protocol |
Illumina Beadstation 500GX according to Illumina protocol
|
| Description |
1771122005_A
|
| Data processing |
Cubic spline normalization, subtracted background, False Discovery Rate using Illumina Beadstudio 3.3 with gene expression module 3.4.0 (GenomeStudio).
|
| |
|
| Submission date |
Apr 29, 2010 |
| Last update date |
Apr 30, 2010 |
| Contact name |
Urban Hellman |
| E-mail(s) |
urban.hellman@medbio.umu.se
|
| Phone |
+46907851621
|
| Organization name |
Umea University
|
| Department |
Public health and clinical medicine
|
| Street address |
Nus 6M
|
| City |
Umea |
| ZIP/Postal code |
90185 |
| Country |
Sweden |
| |
|
| Platform ID |
GPL6101 |
| Series (1) |
| GSE21600 |
Time course study of experimental cardiac hypertrophy in rat |
|
