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GEO accession:
Sample GSM541624
Query DataSets for GSM541624
Status
Public on Nov 15, 2011
Title
Normal-LB3
Sample type
RNA
Source name
ovary
Organism
Gallus gallus
Characteristics
tissue: ovary
disease state: Normal
Extracted molecule
total RNA
Extraction protocol
Trizol
Label
biotin
Label protocol
Ambion MessageAmp Biotin Enhanced kit
Hybridization protocol
Affymetrix Standard protocol
Scan protocol
Affymetrix standard protocol
Description
Affymetrix
Data processing
Affymetrix GCOS
Submission date
May 05, 2010
Last update date
Nov 15, 2011
Contact name
Wei Wang
Organization name
Cornell University
Lab
Microarray Core
Street address
T2-003 Vet Res Tower
City
Ithaca
State/province
NY
ZIP/Postal code
14853
Country
USA
Platform ID
GPL3213
Series (1)
GSE21706
Chicken ovary cancer versus normal
Data table header descriptions
ID_REF
VALUE
signal
ABS_CALL
DETECTION
DETECTION P-VALUE
DETECTION P-VALUE
Data table
ID_REF
VALUE
ABS_CALL
DETECTION P-VALUE
AFFX-BioB-5_at
496.591
P
0.000445901
AFFX-BioB-M_at
729.988
P
4.42873e-05
AFFX-BioB-3_at
592.924
P
4.42873e-05
AFFX-BioC-5_at
1316.05
P
4.42873e-05
AFFX-BioC-3_at
1672.17
P
4.42873e-05
AFFX-BioDn-5_at
2922.81
P
4.42873e-05
AFFX-BioDn-3_at
6250.52
P
0.00010954
AFFX-CreX-5_at
13802.5
P
5.16732e-05
AFFX-CreX-3_at
18450.3
P
4.42873e-05
AFFX-DapX-5_at
3.4596
A
0.574038
AFFX-DapX-M_at
23.8823
A
0.0894781
AFFX-DapX-3_at
4.62343
A
0.83416
AFFX-LysX-5_at
6.73384
A
0.631562
AFFX-LysX-M_at
4.60101
A
0.824672
AFFX-LysX-3_at
2.22141
A
0.772364
AFFX-PheX-5_at
2.29387
A
0.876428
AFFX-PheX-M_at
3.67611
A
0.834139
AFFX-PheX-3_at
37.483
A
0.327079
AFFX-ThrX-5_at
4.24914
A
0.760937
AFFX-ThrX-M_at
4.86516
A
0.60308
Total number of rows:
38535
Table truncated, full table size
1501 Kbytes
.
Supplementary file
Size
Download
File type/resource
GSM541624.CEL.gz
3.5 Mb
(ftp)
(http)
CEL
GSM541624.CHP.gz
205.5 Kb
(ftp)
(http)
CHP
Processed data included within Sample table
Processed data provided as supplementary file
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