|
| Status |
Public on Aug 07, 2021 |
| Title |
Pt_19ML0096 |
| Sample type |
genomic |
| |
|
| Source name |
Pt_19ML0096_PB
|
| Organism |
Homo sapiens |
| Characteristics |
cell type: peripheral blood leukocyte
diagnosis: ataxia
|
| Extracted molecule |
genomic DNA |
| Extraction protocol |
The genomic DNA (250 ng) extracted from peripheral blood using chemagic MSM I.
|
| Label |
biotin
|
| Label protocol |
As per manufacturer (CytoScan)
|
| |
|
| Hybridization protocol |
DNA was restriction digested, PCR amplified, fragmented, labeled and hybridized to the array according to the manufacturer's instructions.
|
| Scan protocol |
The Arrays were then washed using GeneChip Fulidics Station 450, and scanned using the Gene Chip Scanner 3000.
|
| Description |
Hybridized to CytoScan 750K
|
| Data processing |
The CEL file was analysed using Chromosome Analysis Suite (Thermo Fisher Scientific) and converted to a CYCHP file to visualize the status of genomic copy number and absence of heterozygosity.
|
| |
|
| Submission date |
Aug 06, 2021 |
| Last update date |
Aug 07, 2021 |
| Contact name |
Chang Ahn Seol |
| E-mail(s) |
changahnseol@gcgenome.com
|
| Phone |
+82-31-260-9255
|
| Organization name |
GC Genome
|
| Department |
Genome Research Center
|
| Street address |
107, Ihyeon-ro 30beon-gil, Giheung-gu
|
| City |
Yongin-si |
| State/province |
Gyeonggi-do |
| ZIP/Postal code |
16924 |
| Country |
South Korea |
| |
|
| Platform ID |
GPL18637 |
| Series (1) |
| GSE181612 |
CytoScan 750K array data for the ataxia patient's sample |
|
