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Sample GSM5526352 Query DataSets for GSM5526352
Status Public on Jan 31, 2024
Title DM158 L BF
Sample type protein
 
Source name blister biopsy
Organism Homo sapiens
Characteristics disease status: DM
location: lesional
Treatment protocol N/A
Growth protocol N/A
Extracted molecule protein
Extraction protocol Blister biopsies and/or EDTA anticoagulated blood samples were centrifuged at 330xg for 10 minutes. Interstitial skin fluid and/or plasma was frozen in 1mL aliquots and stored at -70C until analysis.
Label antibody-linked oligonucleotide tag
Label protocol Sample labeling was performed per Olink Proteomics manufacturer's protocol
 
Hybridization protocol Hybridization and RT-PCR was performed per Olink Proteomics manufacturer's protocol
Scan protocol Plates were read fee-for-service at Olink Proteomics in Watertown, MA
Data processing Data were analyzed with Olink NPX manager software 2.1.0.224
 
Submission date Aug 17, 2021
Last update date Jan 31, 2024
Contact name Jillian M Richmond
E-mail(s) jillian.richmond@umassmed.edu
Organization name UMass Chan Medical School
Department Dermatology
Street address 364 Plantation St
City Worcester
State/province Massachusetts
ZIP/Postal code 01605
Country USA
 
Platform ID GPL30525
Series (2)
GSE182300 Targeted proteomics analysis of Cutaneous Lupus Erythematosus patient interstitial skin fluid and plasma (Neuro Exploratory panel data)
GSE182302 Targeted proteomics analysis of Cutaneous Lupus Erythematosus patient interstitial skin fluid and plasma

Data table header descriptions
ID_REF
VALUE Normalized Protein Expression, (NPX) https://www.olink.com/content/uploads/2021/05/Olink-Data-normalization-White-paper-v2.0.pdf

Data table
ID_REF VALUE
Q8IU54 16.14548
P23588 13.19897
P78560 12.56449
P13385 22.1529
P42892 21.35792
P41208 17.60135
P55291 14.74369
Q9H4F8 15.60637
O60242 15.17244
Q86Z14 19.37658
Q12864 16.32911
Q14956 12.53834
Q10589 13.68775
P18031 12.35381
P37108 14.0819
Q16864 17.28594
Q9H477 11.68626
Q9Y680 20.1798
Q9UJ72 20.36895
P09211 18.27915

Total number of rows: 92

Table truncated, full table size 1 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

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