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Sample GSM556540 Query DataSets for GSM556540
Status Public on Oct 01, 2010
Title A549 treated with formaldehyde 3
Sample type RNA
 
Source name A549 cells
Organism Homo sapiens
Characteristics treatment: 1 ppm formaldehyde
cell line: A549
Treatment protocol Cells at air-liquid interface exposed to 1 ppm formaldehyde for 4 hrs
Growth protocol A549 cells were grown in F-12K
Extracted molecule total RNA
Extraction protocol Qiagen miRNeasy kit
Label Cy3
Label protocol Labeled cRNA were prepared according to the standard Agilent protocol
 
Hybridization protocol Following fragmentation, cRNA was hybridized on Agilent Human miRNA Microarray, ver 1
Scan protocol Microarrays were scanned using Agilent Microarray Scanner
Description miRNA expression data from lung cells treated with formaldehyde
Data processing data were lowess normalized using Agilent software
 
Submission date Jun 15, 2010
Last update date Nov 13, 2013
Contact name Rebecca Catherine Fry
E-mail(s) rfry@unc.edu
Organization name UNC-Chapel Hill
Department Environmental Sciences and Engineering
Street address 1213 MHRC
City Chapel Hill
ZIP/Postal code 27599
Country USA
 
Platform ID GPL6955
Series (1)
GSE22365 miRNA expression data from A549 exposed to formaldehyde

Data table header descriptions
ID_REF
VALUE Lowess normalized signal intensity

Data table
ID_REF VALUE
90 24
128 27
193 27
216 25
249 27
305 25
379 26.5
509 24
511 22
526 23
643 23.5
682 23
735 25
778 23
801 28.5
809 24
832 24
894 24
1088 24.5
1189 23

Total number of rows: 12033

Table truncated, full table size 105 Kbytes.




Supplementary file Size Download File type/resource
GSM556540_FA_Trt_3.txt.gz 1.5 Mb (ftp)(http) TXT
Processed data included within Sample table

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