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Sample GSM5587461 Query DataSets for GSM5587461
Status Public on Apr 11, 2022
Title Intestinal_Tumor_Normal_22457
Sample type genomic
 
Source name Cecum, Mouse DNA, Tissue
Organism Mus musculus
Characteristics Sex: Female
age_days: 432
site: Lab 1
strain: Mixed
cell line: NA
tissue: Cecum
sorted cell type: NA
treatment: NA
pathology: Normal
Extracted molecule genomic DNA
Extraction protocol Genomic DNA was isolated from tissue samples using the AllPrep DNA/RNA Mini Kit (QIAGEN)
Label Cy5 and Cy3
Label protocol Standard Illumina Protocol
 
Hybridization protocol Standard Illumina Protocol
Scan protocol Standard Illumina Protocol
Description Intestinal Tumor Biology
204879580045_R04C02
Data processing SeSAMe software v1.10
20210916_GEO_processed_matrix.csv (Normalized average Beta)
20210916_GEO_signal_intensity_matrix.csv (Unmethylated and methylated signal intensities)
 
Submission date Sep 19, 2021
Last update date Apr 12, 2022
Contact name Wanding Zhou
Organization name Children's Hospital of Philadelphia
Department Pathology and Lab Medicine
Street address 3501 Civic Center Blvd
City Philadelphia
State/province PA
ZIP/Postal code 19104
Country USA
 
Platform ID GPL30650
Series (1)
GSE184410 Mouse DNA methylation atlas using Infinium Mouse Methylation Beadchips

Supplementary file Size Download File type/resource
GSM5587461_204879580045_R04C02_Grn.idat.gz 2.5 Mb (ftp)(http) IDAT
GSM5587461_204879580045_R04C02_Red.idat.gz 2.6 Mb (ftp)(http) IDAT
Processed data are available on Series record

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