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Sample GSM560941 Query DataSets for GSM560941
Status Public on Jun 30, 2010
Title Vas Deferens_E16.5_rep2
Sample type RNA
 
Source name Vas deferens from embryonic day 16.5
Organism Mus musculus
Characteristics tissue: Vas deferens
strain: CD1
sex: Male
age: E16.5
Treatment protocol Male embryos at E14.5, 16.5, 18.5 and P1 were collected from pregnant CD1 mice
Growth protocol Animals were maintained in a humidity- and temperature-controlled environment with food and water provided ad libitum.
Extracted molecule total RNA
Extraction protocol Trizol RNA extraction protocol
Label Biotin
Label protocol Standard Affymetrix protocol
 
Hybridization protocol Standard Affymetrix protocol
Scan protocol Standard Affymetrix protocol
Description n/a
Data processing RMA with a per gene normalization to the median
 
Submission date Jun 29, 2010
Last update date Jun 29, 2010
Contact name Elizabeth M Snyder
E-mail(s) emsnyder@wsu.edu
Organization name Washington State University
Department School of Molecular Biosciences
Lab Griswold
Street address PO Box 647520
City Pullman
State/province WA
ZIP/Postal code 99164-7520
Country USA
 
Platform ID GPL1261
Series (1)
GSE22616 Gene expression in the Efferent duct, Epididymis, and Vas deferens during Embryonic Development

Data table header descriptions
ID_REF
VALUE RMA with a per gene normalization to the median
RMA

Data table
ID_REF VALUE RMA
1415670_at 0.9441085 756.1726
1415671_at 0.95419395 825.2535
1415672_at 1.1838707 2273.765
1415673_at 1.2654555 221.1433
1415674_a_at 1.3187804 601.91254
1415675_at 1.299109 567.63403
1415676_a_at 1.212027 2098.9407
1415677_at 1.0489309 450.32462
1415678_at 0.8924896 756.2491
1415679_at 1.2226107 1875.7881
1415680_at 0.7821711 573.69257
1415681_at 1.3445725 822.671
1415682_at 1.0643405 260.08722
1415683_at 1.0409493 1084.5632
1415684_at 1.2213792 256.15485
1415685_at 0.9058339 256.88165
1415686_at 0.993412 773.54755
1415687_a_at 1.1943941 1682.3262
1415688_at 0.999692 988.0298
1415689_s_at 1.0872881 347.03555

Total number of rows: 45101

Table truncated, full table size 1374 Kbytes.




Supplementary file Size Download File type/resource
GSM560941_Daniela-VasDeferens-E16-2_2_-030106.CEL.gz 3.5 Mb (ftp)(http) CEL
Processed data included within Sample table

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