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Sample GSM570910 Query DataSets for GSM570910
Status Public on Jul 10, 2013
Title Pituitary, biological replicate 3
Sample type RNA
 
Source name Normal pituitary, sample 09/782
Organism Rattus norvegicus
Characteristics strain: Sprague–Dawley white eye/Wistar–Kyoto
age: 6 months
gender: Male
genotype/variation: wildtype
tissue: normal pituitary
Growth protocol Animals per housed under spf conditions
Extracted molecule total RNA
Extraction protocol RNeasy Mini Kit (Qiagen) including DNase treatment
Label biotin
Label protocol GeneChip® Whole Transcript (WT) Sense Target Labeling Assay (Affymetrix)
 
Hybridization protocol According to the Affymetrix expression protocol (HWS kit)
Scan protocol According to the Affymetrix expression protocol
Description Gene expression data from normal pituitary
Data processing RMA probeset summary and quantile normalisation (Expression console)
 
Submission date Jul 27, 2010
Last update date Dec 18, 2013
Contact name Johannes Beckers
E-mail(s) johannes.beckers@helmholtz-munich.de
Organization name Helmholtz Zentrum Muenchen
Department Institute of Experimental Genetics
Street address Ingolstaedter Landstr. 1
City Neuherberg
ZIP/Postal code 85764
Country Germany
 
Platform ID GPL6247
Series (2)
GSE23207 Transcriptome analysis of MENX‑associated rat pituitary adenomas identifies novel molecular mechanisms involved in the pathogenesis of human pituitary gonadotroph adenomas
GSE29457 Characterization of neuroendocrine tumors in heterozygous mutant MENX rats: a novel model of invasive medullary thyroid carcinoma [pituitary]

Data table header descriptions
ID_REF
VALUE log2 RMA normalized signal intensity

Data table
ID_REF VALUE
10700001 12.4813
10700002 7.052503
10700003 10.88864
10700004 5.613496
10700005 9.576718
10700006 2.51017
10700007 2.690821
10700008 2.307276
10700009 9.409372
10700010 3.06225
10700011 4.869974
10700012 4.122814
10700013 11.71196
10700014 10.77425
10700015 9.504943
10700016 2.574068
10700017 6.250756
10700018 2.442707
10700019 2.619215
10700020 12.3371

Total number of rows: 29214

Table truncated, full table size 510 Kbytes.




Supplementary file Size Download File type/resource
GSM570910.CEL.gz 4.0 Mb (ftp)(http) CEL
Processed data included within Sample table

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