NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Sample GSM5733275 Query DataSets for GSM5733275
Status Public on Dec 15, 2021
Title PCW-1001-10uM-24h-1
Sample type RNA
 
Source name MCF7, PCW-1001, 10uM, 24h
Organism Homo sapiens
Characteristics cell line: MCF7
treatment: PCW-1001
Treatment protocol MCF7 cells were treated with DMSO and 10 μM PCW-1001 for 24 h
Growth protocol MCF7 cells were maintained in Dulbecco’s modified Eagle medium (DMEM; Corning, NY, USA) supplemented with 10% fetal bovine serum (Corning) and 1% penicillin/streptomycin (GenDEPOT, USA) or 1% ZellShieldTM (Minerva Biolabs, Berlin, Germany). The cells maintained under standard conditions, at humidified atmosphere of 5% CO2 at 37°C.
Extracted molecule total RNA
Extraction protocol Total RNA was extracted by standard protocol
Label n/a
Label protocol n/a
 
Hybridization protocol n/a
Scan protocol n/a
Data processing Quantitative changes in mRNA levels were analyzed and clustered using the nSolver software (NanoString Technologies).
 
Submission date Dec 14, 2021
Last update date Dec 15, 2021
Contact name Minsung Kang
Organization name Korea institute of radiological and medical sciences
Street address 75 Nowon-ro
City Seoul
ZIP/Postal code 01812
Country South Korea
 
Platform ID GPL27026
Series (1)
GSE190883 PCW-1001, a novel pyrazole compound, modulates the expression of DNA damage response genes

Data table header descriptions
ID_REF
VALUE signal

Data table
ID_REF VALUE
NM_003392.3 7.33
NM_000584.2 204.22
NM_004083.4 1632.83
NM_003638.1 6.41
NM_015559.2 7.33
NM_032415.2 2.75
NM_003914.3 6.41
NM_001011645.1 6.41
NM_004119.1 6.41
NM_000090.3 8.24
NM_014496.1 7.33
NM_007191.2 10.07
NM_019058.2 1639.24
NM_002048.2 1
NM_004131.3 2.75
NM_020530.3 6.41
NM_001204318.1 6.41
NM_000594.2 9.16
NM_003285.2 7.33
ERCC_00144.1 6

Total number of rows: 784

Table truncated, full table size 14 Kbytes.




Supplementary file Size Download File type/resource
GSM5733275_20181121_20181120-pathway_ah-14-3-1_07.RCC.gz 8.5 Kb (ftp)(http) RCC
Processed data included within Sample table

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap