|
Status |
Public on Oct 27, 2010 |
Title |
Monocyte-derived Dc #1 |
Sample type |
RNA |
|
|
Source name |
in vitro differentiated Monocyte-derived Dendritic cell
|
Organism |
Homo sapiens |
Characteristics |
tissue: blood (buffy coat) cell type: Monocyte-derived dendritic cell
|
Growth protocol |
monocyte derived DC: CD14+ monocyte were cultured in the presence of IL4 and GMCSF, other DC subtypes were not treated
|
Extracted molecule |
total RNA |
Extraction protocol |
RNeasy mini kit was used to extract total RNA (according to the manufacturer's instructions).
|
Label |
biotin
|
Label protocol |
Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 200 ng total RNA using 3` IVT Expression kit (Affymetrix).
|
|
|
Hybridization protocol |
10 ug of fragmented biotinylated cRNA was hybridized for 16 hr at 45C on GeneChip HG133_plus2.0. GeneChips were washed and stained in the Affymetrix Fluidics Station 450.
|
Scan protocol |
GeneChips were scanned using the Affymetrix GeneChip Scanner 7G.
|
Description |
A88
|
Data processing |
CHP file were generated by Affymetrix Expression Console, using RMA algorithm
|
|
|
Submission date |
Aug 13, 2010 |
Last update date |
Sep 01, 2016 |
Contact name |
LAJOS SZELES |
E-mail(s) |
szelesl@dote.hu
|
Organization name |
UNIVERSITY OF DEBRECEN
|
Street address |
Egyetem tér
|
City |
DEBRECEN |
ZIP/Postal code |
H-4028 |
Country |
Hungary |
|
|
Platform ID |
GPL570 |
Series (1) |
GSE23618 |
Transcriptome profiling of dendritic cell subtypes |
|
Relations |
Reanalyzed by |
GSE86362 |