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Sample GSM5825766 Query DataSets for GSM5825766
Status Public on Jan 20, 2023
Title BALB/c 760
Sample type RNA
 
Source name BM-MSC isolated from control BALB/c at 12 weeks
Organism Mus musculus
Characteristics strain: BALB/c
disease state: control
tissue: bone marrow
cell type: bone marrow-mesenchymal cells (BM-MSCs)
age: 12 weeks
Extracted molecule total RNA
Extraction protocol Total RNA was extracted using the Mirneasy mini kit (QIAGEN).
Label biotin
Label protocol RNA was labeled according to manufacturer's recommended protocols
 
Hybridization protocol Hybridization was performed according to manufacturer's standard protocols
Scan protocol Gene microarrays were scanned with the Gene Chip System 3000 Scanner
Description Gene expression data from MSCs isolated from the bone of BALB/c mice (ID 760) at 12 weeks
Data processing Raw data were pre-processed using the sst-RMA algorithm implemented in the Transcriptome Analysis Console software (Thermo Fisher Scientific).
 
Submission date Jan 19, 2022
Last update date Jan 20, 2023
Contact name Milena Perrone
E-mail(s) milenaperrone@gmail.com
Organization name IRCCS Istituto Nazionale dei Tumori
Street address Via Amadeo 42
City Milano
ZIP/Postal code 20133
Country Italy
 
Platform ID GPL23038
Series (1)
GSE194032 Expression data from mesenchymal stem cells isolated from the bone marrow of tumor-bearing NeuT mice and relative BALB/c controls

Data table header descriptions
ID_REF
VALUE sst-RMA signal intensity

Data table
ID_REF VALUE
AFFX-BioB-3_at 10.23885953
AFFX-BioB-5_at 9.613026167
AFFX-BioB-M_at 10.31786911
AFFX-BioC-3_at 10.32197799
AFFX-BioC-5_at 11.09444975
AFFX-BioDn-3_at 12.56652675
AFFX-BioDn-5_at 11.62786341
AFFX-BkGr-GC03_st 3.768797647
AFFX-BkGr-GC04_st 3.688966151
AFFX-BkGr-GC05_st 3.754204984
AFFX-BkGr-GC06_st 3.779405516
AFFX-BkGr-GC07_st 3.828372446
AFFX-BkGr-GC08_st 3.89615169
AFFX-BkGr-GC09_st 3.98599145
AFFX-BkGr-GC10_st 4.12674268
AFFX-BkGr-GC11_st 4.280898094
AFFX-BkGr-GC12_st 4.622471108
AFFX-BkGr-GC13_st 5.121300775
AFFX-BkGr-GC14_st 5.877791281
AFFX-BkGr-GC15_st 6.520620411

Total number of rows: 29129

Table truncated, full table size 871 Kbytes.




Supplementary file Size Download File type/resource
GSM5825766_MN60.CEL.gz 1.2 Mb (ftp)(http) CEL
Processed data included within Sample table

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