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Sample GSM585349 Query DataSets for GSM585349
Status Public on Mar 01, 2011
Title T50
Sample type RNA
 
Source name human breast cancer tumors
Organism Homo sapiens
Characteristics age.at.diagnosis: 35
er.ihc: positive
pr.ihc: positive
Extracted molecule total RNA
Extraction protocol Guanidinium isothiocyanate and centrifugation over a cesium chloride gradient.
Label biotin
Label protocol see Affymetrix standard protocols (www.affymetrix.com)
 
Hybridization protocol see Affymetrix standard protocols (www.affymetrix.com)
Scan protocol see Affymetrix standard protocols (www.affymetrix.com)
Description Primary breast tumor
Data processing RMA using a quantile normalization (R package affy, v 1.20.0)
 
Submission date Aug 19, 2010
Last update date Mar 01, 2011
Contact name Pascal FINETTI
E-mail(s) finettip@ipc.unicancer.fnclcc.fr
Phone (33)+4 91 22 33 04
Organization name Institut Paoli-Calmettes
Department Centre de cancérologie de Marseille
Lab Molecular Oncology
Street address 232 Bd Ste Marguerite
City Marseille
State/province BdR
ZIP/Postal code 13009
Country France
 
Platform ID GPL570
Series (1)
GSE23720 High-resolution comparative genomic hybridization of inflammatory breast cancer and identification of candidate genes

Data table header descriptions
ID_REF
VALUE log2 RMA signal

Data table
ID_REF VALUE
1007_s_at 10.446
1053_at 7.151
117_at 5.714
121_at 6.286
1255_g_at 2.43
1294_at 7.177
1316_at 4.229
1320_at 4.448
1405_i_at 8.065
1431_at 4.664
1438_at 6.776
1487_at 6.667
1494_f_at 5.171
1552256_a_at 8.692
1552257_a_at 8.908
1552258_at 4.755
1552261_at 4.095
1552263_at 4.431
1552264_a_at 6.213
1552266_at 3.271

Total number of rows: 54675

Table truncated, full table size 892 Kbytes.




Supplementary file Size Download File type/resource
GSM585349.CEL.gz 4.8 Mb (ftp)(http) CEL
Processed data included within Sample table

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