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GEO accession:
Sample GSM5897885
Query DataSets for GSM5897885
Status
Public on Apr 03, 2022
Title
HCT116 ShSrx cells
Sample type
RNA
Source name
HCT116 cells
Organism
Homo sapiens
Characteristics
srx depetion: cancer cells ShSrx
assays: microRNA 4.0 array
Treatment protocol
none.
Growth protocol
normal cell culture medium and conditions.
Extracted molecule
total RNA
Extraction protocol
Qiagen RNA mini kit
Label
biotin
Label protocol
Superscript III indirect cDNA labelling system (invitrogen)
Hybridization protocol
standard
Scan protocol
Affymetrix chip standard
Description
total RNA extracted using Qiagen kit
Data processing
TAC or Partek Flow recommended
Submission date
Feb 14, 2022
Last update date
Apr 03, 2022
Contact name
Qiou Wei
E-mail(s)
qiou.wei@uky.edu
Phone
8592570086
Organization name
University of Kentucky College of Medicine
Street address
324 HSRB, 1095 VA Drive
City
Lexington
State/province
KY
ZIP/Postal code
40513
Country
USA
Platform ID
GPL21572
Series (1)
GSE196668
Sulfiredoxin promotes cancer cell invasion through regulation of the miR143-Fascin axis
Data table header descriptions
ID_REF
VALUE
Quantification
DETECTION P-VALUE
Data table
ID_REF
VALUE
DETECTION P-VALUE
20500112
12.2468
8.72176e-16
20500113
0.575635
0.868935
20500114
3.46266
1.65896e-05
20500115
11.6092
8.72176e-16
20500116
1.18885
0.213614
20500117
10.193
8.72176e-16
20500118
0.567511
0.915985
20500119
12.3195
8.72176e-16
20500120
1.50636
0.0650307
20500121
11.4624
8.72176e-16
20500122
0.70462
0.527152
20500123
8.89825
9.48103e-16
20500124
1.3828
0.0708945
20500125
0.543327
0.833751
20500126
7.97856
8.72176e-16
20500127
0.986317
0.293958
20500128
12.3207
8.72176e-16
20500129
1.59842
0.0220869
20500130
13.5585
8.72176e-16
20500131
4.76254
5.93574e-10
Total number of rows:
6658
Table truncated, full table size
174 Kbytes
.
Supplementary file
Size
Download
File type/resource
GSM5897885_SHmicroRNA.CEL.gz
703.9 Kb
(ftp)
(http)
CEL
GSM5897885_SHmicroRNA.chp.gz
60.1 Kb
(ftp)
(http)
CHP
Processed data included within Sample table
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