|
| Status |
Public on Sep 29, 2011 |
| Title |
#3440302_drugtreated_CT |
| Sample type |
RNA |
| |
|
| Source name |
#3440302_drugtreated_CT
|
| Organism |
Bos taurus |
| Characteristics |
breed: Holstein
gender: male
tissue: small intestine
|
| Growth protocol |
normal Holstein bull calf (2 to 4 months old fed with hay)
|
| Extracted molecule |
total RNA |
| Extraction protocol |
Trizol followed by Qiagen RNeasy mini cleanup
|
| Label |
Cy3
|
| Label protocol |
Incoporation
|
| |
|
| Hybridization protocol |
see Int. J. Para.39 (7): 813-824. PMID: 19116156
|
| Scan protocol |
Axon GenePix 4000B at 5 um resolution
|
| Data processing |
The data presented here are average fluorescent intensity from either 4 or 8 perfect match oligos that represent a single unique sequence. These data are usually log transformed and subject to quantile normalization method using the R package before analyzed. see Li & Li, BMC Genomics 2006, 7:234
|
| |
|
| Submission date |
Sep 28, 2010 |
| Last update date |
Sep 29, 2011 |
| Contact name |
Robert W Li |
| E-mail(s) |
robert.li@ars.usda.gov
|
| Phone |
301-504-5185
|
| Fax |
301-504-8414
|
| Organization name |
USDA
|
| Department |
Animal & Natural Resources Institute
|
| Lab |
Bovine Functional Genomics Laboratory
|
| Street address |
Barc East
|
| City |
Beltsville |
| State/province |
MD |
| ZIP/Postal code |
20705 |
| Country |
USA |
| |
|
| Platform ID |
GPL3301 |
| Series (1) |
| GSE24402 |
The vitamin D receptor and inducible nitric oxide synthase associated pathways in the development of acquired resistance to Cooperia oncophora infection in cattle |
|
