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Status
Public on Jun 20, 2005
Title
BRN2
Sample type
RNA
Source name
Brain tissue from WT C57BL/6 male mice
Organism
Mus musculus Characteristics
Strain: C57BL/6
Extracted molecule
total RNA
Label
biotin
Description
full description of sample found in Elena M. Comelli, Steven R. Head, Tim Gilmartin, Thomas Whisenant, Stuart M. Haslam, Simon J. North, Nyet-Kui Wong, Takashi Kudo, Hisashi Narimatsu, Jeffrey D. Esko, Kurt Drickamer, Anne Dell, and James C. Paulson. (2005) A Focused Microarray Approach to Functional Glycomics: Transcriptional Regulation of the Glycome.
Data processing
dCHIPv1.3, PM-only algorithm
Submission date
Jun 08, 2005
Last update date
Jun 20, 2005
Contact name
Jennifer A Hammond
E-mail(s)
jhammond@scripps.edu Phone
(858) 784-2263
Fax
(858) 784-2754
URL
http://www.scripps.edu/researchservices/dna_array/ Organization name
The Scripps Research Institute
Lab
DNA Array Core Facility
Street address
10550 N. Torrey Pines Rd.
City
La Jolla
State/province
CA
ZIP/Postal code
92037
Country
USA
Platform ID
GPL1981 Series (1)
GSE2781 A Focused Microarray Approach to Functional Glycomics: Transcriptional Regulation of the Glycome
Data table header descriptions ID_REF VALUE 'signal' a measure of the abundance of a transcript
ABS_CALL the call in an absolute analysis that indicates if the transcript was present (P), absent (A), marginal (M), or no call (NC)
DETECTION P-VALUE 'detection p-value', p-value that indicates the significance level of the detection call
Data table ID_REF VALUE ABS_CALL DETECTION P-VALUE 115855_U74BTARSEQ_at
616.772
P
0.001953
1405_i_at
167.992
A
0.877253
200004_at
1724.97
P
0.000732
200010_at
280.533
A
0.19458
200012_x_at
667.505
P
0.037598
200017_at
208.64
A
0.171387
200024_at
405.709
A
0.334473
200025_s_at
47.3814
A
0.095215
200026_at
246.429
P
0.018555
200032_s_at
136.382
P
0.010742
200038_s_at
117.548
A
0.398926
200046_at
250.644
P
0.000244
200061_s_at
113.358
A
0.334473
200068_s_at
135.14
A
0.246094
200089_s_at
114.135
A
0.601074
200091_s_at
66.9497
A
0.246094
200095_x_at
122.903
P
0.01416
200642_at
202.806
A
0.72583
200643_at
409.323
A
0.72583
200647_x_at
228.915
A
0.5
1814 54 Kbytes .Supplementary data files not provided
