NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Sample GSM630734 Query DataSets for GSM630734
Status Public on Jan 31, 2016
Title day 0 differentiated oligodendrocytes (rep 3)
Sample type RNA
 
Source name day 0 differentiated oligodendrocytes (rep 3)
Organism Rattus norvegicus
Characteristics sample type: Sprague-Dawley neonatal rat isolated oligodendrocytes
strain: Sprague-Dawley
cell type: oligodendrocytes
differentiation state: day 0 differentiated oligodendrocyte
Treatment protocol Oligodendrocyte progenitors were treated for 24 or 48 hrs with PD169316
Growth protocol Oligodendrocytes were isolated according to the protocol of McCarthy & De Vellis (PMID: 6248568)
Extracted molecule total RNA
Extraction protocol Extracted using the Qiagen Rneasy RNA extraction kit
Label Cy3
Label protocol Cy3 - according to Illumina manufacturer instructions CATALOG # BD-901-1002
 
Hybridization protocol according to Illumina manufacturer instructions
Scan protocol according to Illumina manufacturer instructions
Description SRD234
Data processing FlexArray Software (GenomeQuebec)
 
Submission date Nov 29, 2010
Last update date Jan 31, 2016
Contact name Guillermina Almazan
E-mail(s) guillermina.almazan@mcgill.ca
Phone 514-398-6222
Organization name McGill University
Department Pharmacology and Therapeutics
Street address 3655 Prom. Sir William Osler
City Montreal
State/province Quebec
ZIP/Postal code H3G 1Y6
Country Canada
 
Platform ID GPL6101
Series (1)
GSE25670 p38 regulated genes in rat myelinating glia

Data table header descriptions
ID_REF
VALUE average signal
Avg_NBEADS
BEAD_STDERR
Detection Pval

Data table
ID_REF VALUE Avg_NBEADS BEAD_STDERR Detection Pval
ILMN_1369537 246.5445 39 13.08379 0
ILMN_1358051 144.2916 34 5.695874 0.05759804
ILMN_1361746 124.7029 44 4.841113 0.3210784
ILMN_1351370 126.4215 41 5.324226 0.2732843
ILMN_1357910 448.942 38 20.08962 0
ILMN_1352975 522.1129 42 18.74425 0
ILMN_1368384 141.6025 41 5.786481 0.0747549
ILMN_1355285 125.9221 33 5.903626 0.2879902
ILMN_1376898 140.2516 37 5.731749 0.08578432
ILMN_1368325 567.523 48 21.48693 0
ILMN_1353563 2247.242 35 62.42122 0
ILMN_1348794 99.01678 32 5.088789 0.9595588
ILMN_1364273 317.5601 42 11.11267 0
ILMN_1369433 160.4104 52 7.346214 0
ILMN_1349007 423.1275 38 14.11401 0
ILMN_1374156 137.5306 40 5.850564 0.1029412
ILMN_1360232 2271.315 53 56.7086 0
ILMN_1355155 4757.106 37 145.7527 0
ILMN_1362563 185.2995 53 8.143697 0
ILMN_1355815 169.1261 41 9.95566 0

Total number of rows: 22523

Table truncated, full table size 884 Kbytes.




Supplementary data files not provided
Processed data not provided for this record

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap