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| Status |
Public on May 21, 2023 |
| Title |
C1784 |
| Sample type |
genomic |
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| Source name |
Chorionic villus
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| Organism |
Homo sapiens |
| Characteristics |
maternal age: 36
pregnant outcome: Early embryo growth arrest
prenatal diagnosis: Pathogenic CNVs
chromosomal abnormality: 45,X
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| Extracted molecule |
genomic DNA |
| Extraction protocol |
Fetal DNA samples were extracted from chorionic villi, amniotic fluid or skin tissues using the QIAGEN DNA Mini Kit (Qiagen, Valencia, CA, USA).
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| Label |
biotin
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| Label protocol |
DNA was digested, amplified, purified, fragmented, labeled and hybridized according to the standard Affymetrix protocol.
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| Hybridization protocol |
DNA was digested, amplified, purified, fragmented, labeled and hybridized according to the standard Affymetrix protocol.
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| Scan protocol |
SNP arrays were scanned with GeneChip Scanner 3000 7G System.
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| Description |
Single nucleotide polymorphism array
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| Data processing |
Raw CEL data was annotated using GRCh37 (hg19) genome version and was converted into CYCHP form through the ChAS. SNP array was further analyzed using ChAS.
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| Submission date |
Jul 11, 2022 |
| Last update date |
May 23, 2023 |
| Contact name |
Haiwei Wang |
| E-mail(s) |
hwwang@sibs.ac.cn
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| Organization name |
Fujian Maternity and Child Health Hospital
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| Street address |
Daoshan road 180
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| City |
FuZhou |
| State/province |
FuJian |
| ZIP/Postal code |
350001 |
| Country |
China |
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| Platform ID |
GPL18637 |
| Series (1) |
| GSE207887 |
Chromosomal abnormalities of 564 miscarriages |
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| Supplementary file |
Size |
Download |
File type/resource |
| GSM6322114_20190603_154232_021_C1784.cy750K.cychp.gz |
25.9 Mb |
(ftp)(http) |
CYCHP |
| Processed data provided as supplementary file |
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