|
| Status |
Public on Jun 01, 2011 |
| Title |
Pca_WCIPC-000079 |
| Sample type |
RNA |
| |
|
| Source name |
Prostate
|
| Organism |
Homo sapiens |
| Characteristics |
disease state: Prostate Cancer
tissue: Prostate cancer tumor
group: Prostate Cancer
biochemical recurrence: Recurrence
time f/u: 114
time no bcr: 37
time bcr: 38
time clinical recurrence: 97
time metastatic recurrence: 0
psa: 9.2
gleason score: 7
tumor stage: T2b
patient number: WCIPC-000079
|
| Extracted molecule |
total RNA |
| Extraction protocol |
Ambion Recoverall on MagMax Express 96 as described in Abramovitz et al, Biotechniques, 44(3): 417-23.
|
| Label |
biotin
|
| Label protocol |
PCR product was prepared with standard Illumina protocol for arrays
|
| |
|
| Hybridization protocol |
Standard Illumina hybridization protocol
|
| Scan protocol |
SAMs were scanned using Illumina BeadArray Scanner
|
| Description |
Prostate Cancer
|
| Data processing |
The data were normalized using quantile-normalization with GenomeStudio V2010.1
|
| |
|
| Submission date |
Dec 11, 2010 |
| Last update date |
Jun 01, 2011 |
| Contact name |
Gregory Doho |
| E-mail(s) |
gdoho@emory.edu
|
| Organization name |
Emory University
|
| Street address |
1365B Clifton Rd NE
|
| City |
Atlanta |
| State/province |
GA |
| ZIP/Postal code |
30322 |
| Country |
USA |
| |
|
| Platform ID |
GPL11309 |
| Series (2) |
| GSE26022 |
[Gene Expression Training Set] Protein-coding and MicroRNA Biomarkers of Recurrence of Prostate Cancer Following Radical Prostatectomy |
| GSE26367 |
Protein-coding and MicroRNA Biomarkers of Recurrence of Prostate Cancer Following Radical Prostatectomy |
|
