|
| Status |
Public on Jan 27, 2011 |
| Title |
muscle4 |
| Sample type |
SRA |
| |
|
| Source name |
Human Skeletal Muscle Total RNA (Ambion)
|
| Organism |
Homo sapiens |
| Characteristics |
tissue: muscle
|
| Extracted molecule |
total RNA |
| Extraction protocol |
Illumina (2009), mRNA Sequencing: Sample Preparation Guide Part # 1004898 Rev. D
|
| |
|
| Library strategy |
RNA-Seq |
| Library source |
transcriptomic |
| Library selection |
cDNA |
| Instrument model |
Illumina Genome Analyzer |
| |
|
| Description |
GG-H exon
|
| Data processing |
Alignment: sequence reads were obtained and mapped to GG-H exons using SeqMap (http://biogibbs.stanford.edu/~jiangh/SeqMap). All reads mapping with two or fewer mismatches were retained for further analysis
|
| |
|
| Submission date |
Dec 16, 2010 |
| Last update date |
May 15, 2019 |
| Contact name |
Weihong Xu |
| E-mail(s) |
weihongx@stanford.edu
|
| Organization name |
Stanford Genome Technology Center
|
| Department |
Department of Biochemistry
|
| Lab |
Ron W. Davis
|
| Street address |
855 California Ave
|
| City |
Palo Alto |
| State/province |
CA |
| ZIP/Postal code |
94304 |
| Country |
USA |
| |
|
| Platform ID |
GPL9052 |
| Series (2) |
| GSE26109 |
A human transcriptome array for high-throughput clinical studies (with a comparison to RNA-seq technology) [RNA-Seq] |
| GSE26118 |
A human transcriptome array for high-throughput clinical studies (with a comparison to RNA-seq technology) |
|
| Relations |
| SRA |
SRX035967 |
| BioSample |
SAMN00188842 |
