NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Sample GSM642664 Query DataSets for GSM642664
Status Public on Mar 31, 2011
Title wolf
Sample type genomic
 
Channel 1
Source name Gray Wolf
Organism Canis lupus
Characteristics breed: Gray Wolf
Extracted molecule genomic DNA
Extraction protocol Standard NimbleGen protocols
Label Cy3
Label protocol Standard NimbleGen protocols
 
Channel 2
Source name Boxer
Organism Canis lupus familiaris
Characteristics breed: Boxer
Extracted molecule genomic DNA
Extraction protocol Standard NimbleGen protocols
Label Cy5
Label protocol Standard NimbleGen protocols
 
 
Hybridization protocol Standard NimbleGen protocols
Scan protocol Standard NimbleGen protocols
Data processing Standard NimbleGen protocols using NimbleScan software.
 
Submission date Dec 18, 2010
Last update date Mar 31, 2011
Contact name Tom Nicholas
E-mail(s) tjn3@u.washington.edu
Organization name University of Washington
Street address Foege Building S-250, Box 355065 3720 15th Ave NE
City Seattle
State/province WA
ZIP/Postal code 98195
Country USA
 
Platform ID GPL11335
Series (1)
GSE26170 Genome-wide CNVs within and between breeds

Data table header descriptions
ID_REF
VALUE scaled, log2 ratios (Cy3/Cy5)

Data table
ID_REF VALUE
CHR01FS003000891 -0.208
CHR01FS003002366 -0.454
CHR01FS003006126 0.177
CHR01FS003008426 -0.087
CHR01FS003009706 -0.141
CHR01FS003015159 0.463
CHR01FS003019675 0.004
CHR01FS003021107 0.396
CHR01FS003022577 0.315
CHR01FS003029599 0.361
CHR01FS003030794 -0.904
CHR01FS003031929 0.015
CHR01FS003032959 0.055
CHR01FS003038014 0.359
CHR01FS003039559 0.427
CHR01FS003042089 0.225
CHR01FS003043866 0.260
CHR01FS003044907 0.364
CHR01FS003046077 0.060
CHR01FS003047027 -0.027

Total number of rows: 2164507

Table truncated, full table size 49480 Kbytes.




Supplementary file Size Download File type/resource
GSM642664_24074602_532.pair.gz 35.1 Mb (ftp)(http) PAIR
GSM642664_24074602_635.pair.gz 35.0 Mb (ftp)(http) PAIR
Processed data included within Sample table

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap