|
| Status |
Public on Aug 14, 2022 |
| Title |
C20 MI |
| Sample type |
SRA |
| |
|
| Source name |
Muscle
|
| Organism |
Capra hircus |
| Characteristics |
tissue: Muscle
group: MI
treatment: 30 minutes of transportation
|
| Extracted molecule |
total RNA |
| Extraction protocol |
Blood RNA was extracted using a MagMAX™ Stabilized Blood Tubes RNA Isolation Kit by applied biosystems (Thermo Fisher Scientific, Waltham, MA) according to manufacturer’s instructions. Muscle RNA was extracted by using RNeasy® Fibrous Tissue Mini Kit (Qiagen, Germantown, MD) according to manufacturer’s procedures
NEBNext® UltraTM RNA Library Prep kit from Illumina® (NEB, USA) were used to generate the sequencing libraries
|
| |
|
| Library strategy |
RNA-Seq |
| Library source |
transcriptomic |
| Library selection |
cDNA |
| Instrument model |
Illumina HiSeq 4000 |
| |
|
| Description |
Muscle samples collected after 30 minutes of transportation
|
| Data processing |
Data processing was done by Novagene
Methods uploaded
|
| |
|
| Submission date |
Aug 09, 2022 |
| Last update date |
Aug 14, 2022 |
| Contact name |
phaneendra batchu |
| E-mail(s) |
phaneendra.batchu@fvsu.edu
|
| Organization name |
fort valley state university
|
| Department |
Animal Science
|
| Lab |
Meat Science
|
| Street address |
1005 State univerity drive
|
| City |
fort valley |
| State/province |
georgia |
| ZIP/Postal code |
31030 |
| Country |
USA |
| |
|
| Platform ID |
GPL22146 |
| Series (1) |
| GSE210823 |
RNA-Seq Exploration of the Influence of Stress on Meat Quality in Spanish Goats |
|
| Relations |
| BioSample |
SAMN30218901 |
| SRA |
SRX17005595 |
