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GEO accession:
Sample GSM644179
Query DataSets for GSM644179
Status
Public on Jun 01, 2011
Title
ref RNA3 Val Set
Sample type
RNA
Source name
Commercial
Organism
Homo sapiens
Characteristics
group: ref RNA
Extracted molecule
total RNA
Extraction protocol
Ambion Recoverall on MagMax Express 96 as described in Abramovitz et al, Biotechniques, 44(3): 417-23.
Label
biotin
Label protocol
PCR product was prepared with standard Illumina protocol for arrays
Hybridization protocol
Standard Illumina hybridization protocol
Scan protocol
SAMs were scanned using Illumina BeadArray Scanner
Description
ref RNA_Ctrl
Data processing
The data were normalized using quantile-normalization with GenomeStudio V2010.1
Submission date
Dec 21, 2010
Last update date
Jun 01, 2011
Contact name
Gregory Doho
E-mail(s)
gdoho@emory.edu
Organization name
Emory University
Street address
1365B Clifton Rd NE
City
Atlanta
State/province
GA
ZIP/Postal code
30322
Country
USA
Platform ID
GPL11309
Series (2)
GSE26242
[Gene Expression Validation Set] Protein-coding and MicroRNA Biomarkers of Recurrence of Prostate Cancer Following Radical Prostatectomy
GSE26367
Protein-coding and MicroRNA Biomarkers of Recurrence of Prostate Cancer Following Radical Prostatectomy
Data table header descriptions
ID_REF
VALUE
The values are linear and represent quantile-normalized expression signal
Detection Pval
Data table
ID_REF
VALUE
Detection Pval
2808
1695.848
3.68E-38
4061
614.7466
2.33E-14
4870
1267.632
3.68E-38
1219
385.8113
0.272294
2822
409.284
0.09390347
3482
356.3037
0.6133912
1871
368.6089
0.4662619
3160
368.2852
0.4701624
3640
700.3867
1.93E-24
1002
1673.015
3.68E-38
2902
1641.518
3.68E-38
5246
1243.8
3.68E-38
2257
2035.703
3.68E-38
2802
791.8158
3.68E-38
3031
640.106
4.81E-17
361
2107.651
3.68E-38
780
976.1652
3.68E-38
2328
779.4297
2.57E-36
1665
1234.361
3.68E-38
5476
1348.97
3.68E-38
Total number of rows:
1536
Table truncated, full table size
34 Kbytes
.
Supplementary data files not provided
Processed data included within Sample table
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