NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Sample GSM649484 Query DataSets for GSM649484
Status Public on Jan 06, 2011
Title B7_4h-C1
Sample type RNA
 
Source name Sensitive control
Organism Homo sapiens
Characteristics cell type: tumor breast
cell line: MCF7
Extracted molecule total RNA
Extraction protocol extraction of total RNA was performed according to the manufacturer's instructions.
Label biotin
Label protocol Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 6 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).
 
Hybridization protocol Standard Affymetrix procedure
Scan protocol Standard Affymetrix procedure
Data processing The data were analyzed with dchip with default parameters.
 
Submission date Jan 05, 2011
Last update date Jan 06, 2011
Contact name Ross Levine
Organization name MSKCC
Street address RRL
City Manhattan
State/province NY
ZIP/Postal code 10023
Country USA
 
Platform ID GPL570
Series (1)
GSE26459 High-throughput ectopic expression screen for tamoxifen resistance

Data table header descriptions
ID_REF
VALUE dChip signal intensity

Data table
ID_REF VALUE
AFFX-BioB-5_at 547.329
AFFX-BioB-M_at 758.767
AFFX-BioB-3_at 601.849
AFFX-BioC-5_at 474.338
AFFX-BioC-3_at 536.28
AFFX-BioDn-5_at 2671.129
AFFX-BioDn-3_at 7486.985
AFFX-CreX-5_at 11325.522
AFFX-CreX-3_at 10126.765
AFFX-DapX-5_at 17.41
AFFX-DapX-M_at 13.789
AFFX-DapX-3_at 3.116
AFFX-LysX-5_at 11.389
AFFX-LysX-M_at 4.114
AFFX-LysX-3_at 10.282
AFFX-PheX-5_at 11.808
AFFX-PheX-M_at 9.078
AFFX-PheX-3_at 41.834
AFFX-ThrX-5_at 5.972
AFFX-ThrX-M_at 7.843

Total number of rows: 54675

Table truncated, full table size 933 Kbytes.




Supplementary file Size Download File type/resource
GSM649484.CEL.gz 4.3 Mb (ftp)(http) CEL
GSM649484.EXP.gz 505 b (ftp)(http) EXP
Processed data included within Sample table

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap