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Sample GSM649489 Query DataSets for GSM649489
Status Public on Jan 06, 2011
Title B7_4h-E3
Sample type RNA
 
Source name Sensitive estradiol
Organism Homo sapiens
Characteristics cell type: tumor breast
cell line: MCF7
Extracted molecule total RNA
Extraction protocol extraction of total RNA was performed according to the manufacturer's instructions.
Label biotin
Label protocol Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 6 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).
 
Hybridization protocol Standard Affymetrix procedure
Scan protocol Standard Affymetrix procedure
Data processing The data were analyzed with dchip with default parameters.
 
Submission date Jan 05, 2011
Last update date Jan 06, 2011
Contact name Ross Levine
Organization name MSKCC
Street address RRL
City Manhattan
State/province NY
ZIP/Postal code 10023
Country USA
 
Platform ID GPL570
Series (1)
GSE26459 High-throughput ectopic expression screen for tamoxifen resistance

Data table header descriptions
ID_REF
VALUE dChip signal intensity

Data table
ID_REF VALUE
AFFX-BioB-5_at 635.645
AFFX-BioB-M_at 785.704
AFFX-BioB-3_at 754.648
AFFX-BioC-5_at 533.672
AFFX-BioC-3_at 545.117
AFFX-BioDn-5_at 3530.284
AFFX-BioDn-3_at 6940.888
AFFX-CreX-5_at 13123.562
AFFX-CreX-3_at 11451.425
AFFX-DapX-5_at 14.343
AFFX-DapX-M_at 11.272
AFFX-DapX-3_at 5.229
AFFX-LysX-5_at 14.62
AFFX-LysX-M_at 6.771
AFFX-LysX-3_at 15.697
AFFX-PheX-5_at 7.934
AFFX-PheX-M_at 6.96
AFFX-PheX-3_at 45.869
AFFX-ThrX-5_at 3.404
AFFX-ThrX-M_at 3.64

Total number of rows: 54675

Table truncated, full table size 933 Kbytes.




Supplementary file Size Download File type/resource
GSM649489.CEL.gz 4.3 Mb (ftp)(http) CEL
GSM649489.EXP.gz 364 b (ftp)(http) EXP
Processed data included within Sample table

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