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Sample GSM649498 Query DataSets for GSM649498
Status Public on Jan 06, 2011
Title G11OH-T_4h-C3
Sample type RNA
 
Source name Resistant control
Organism Homo sapiens
Characteristics cell type: tumor breast
cell line: MCF7
Extracted molecule total RNA
Extraction protocol extraction of total RNA was performed according to the manufacturer's instructions.
Label biotin
Label protocol Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 6 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).
 
Hybridization protocol Standard Affymetrix procedure
Scan protocol Standard Affymetrix procedure
Data processing The data were analyzed with dchip with default parameters.
 
Submission date Jan 05, 2011
Last update date Jan 06, 2011
Contact name Ross Levine
Organization name MSKCC
Street address RRL
City Manhattan
State/province NY
ZIP/Postal code 10023
Country USA
 
Platform ID GPL570
Series (1)
GSE26459 High-throughput ectopic expression screen for tamoxifen resistance

Data table header descriptions
ID_REF
VALUE dChip signal intensity

Data table
ID_REF VALUE
AFFX-BioB-5_at 541.56
AFFX-BioB-M_at 645.637
AFFX-BioB-3_at 553.004
AFFX-BioC-5_at 480.131
AFFX-BioC-3_at 494.35
AFFX-BioDn-5_at 3206.533
AFFX-BioDn-3_at 6604.691
AFFX-CreX-5_at 12283.612
AFFX-CreX-3_at 10418.431
AFFX-DapX-5_at 17.786
AFFX-DapX-M_at 20.962
AFFX-DapX-3_at 5.394
AFFX-LysX-5_at 13.263
AFFX-LysX-M_at 5.288
AFFX-LysX-3_at 10.42
AFFX-PheX-5_at 8.151
AFFX-PheX-M_at 5.308
AFFX-PheX-3_at 39.908
AFFX-ThrX-5_at 5.987
AFFX-ThrX-M_at 4.078

Total number of rows: 54675

Table truncated, full table size 934 Kbytes.




Supplementary file Size Download File type/resource
GSM649498.CEL.gz 4.4 Mb (ftp)(http) CEL
GSM649498.EXP.gz 510 b (ftp)(http) EXP
Processed data included within Sample table

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