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Sample GSM6537853 Query DataSets for GSM6537853
Status Public on Sep 03, 2022
Title GGGR 01S-07
Sample type protein
 
Source name Pancreatic cancer
Organism Homo sapiens
Characteristics sample group: GGGR
tissue: Blood
Extracted molecule protein
Extraction protocol Protein was extracted from plasma using a protein extraction buffer (Fullmoon Biosystems, Sunnyvale, CA) and protein expression was analyzed using antibody microarray analysis (Fullmoon Biosystems) according to the manufacturer’s protocol.
Label Biotin/Cy3-Streptavidin
Label protocol 50ug of protein sample was labeled and incubated with coupling mixture on the antibody microarray slide (Fullmoon Biosystems).
 
Hybridization protocol protein sample was detected with Cy3-streptavidin (GE Healthcare, Chalfont St. Giles, UK).
Scan protocol The slide was rinsed scanned using the GenePix 4100A scanner (Axon Instrument, USA) at 10 um resolution, optimal laser power and PMT.
Description 01S-07-Visit 1
Data processing Following image scanning, they were gridded and quantified with GenePix 7.0 Software (Axon Instrument, USA).
Normalized signal is calculated from average intensity of replicate spots / median signal.
 
Submission date Sep 01, 2022
Last update date Sep 03, 2022
Contact name Jung Hyun Jo
E-mail(s) junghyunjo83@gmail.com
Organization name Yonsei University Health System
Street address 50-1 Yonsei-ro
City Seoul
State/province --- Select ---
ZIP/Postal code 120-752
Country South Korea
 
Platform ID GPL32338
Series (1)
GSE212575 Efficacy of GV1001 with gemcitabine/capecitabine in previously untreated patients with advanced pancreatic ductal adenocarcinoma having high serum eotaxin levels (KG4/2015): an open-label, randomized, phase 3 trial.

Data table header descriptions
ID_REF
VALUE Normalized data (log2)

Data table
ID_REF VALUE
4-1BB Receptor 7.304
Adiponectin 9.440
EG-VEGF 7.567
Endostatin 8.359
Eotaxin 7.466
FGF-acidic 7.774
FGF-basic 7.509
Flt3-Ligand 7.653
G-CSF 7.753
GM-CSF 7.747
IGF-I 8.379
IGF-II 8.303
IL-1RA 7.859
IL-1alpha 7.552
IL-6 7.418
IL-7 7.547
M-CSF 7.667
PDGF-AA 7.945
PDGF-BB 8.076
RANTES 8.125

Total number of rows: 310

Table truncated, full table size 4 Kbytes.




Supplementary file Size Download File type/resource
GSM6537853_01S-07-Visit_1.gpr.gz 79.5 Kb (ftp)(http) GPR
Processed data included within Sample table
Processed data are available on Series record

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