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Sample GSM65717 Query DataSets for GSM65717
Status Public on Sep 21, 2005
Title HSC_control_3
Sample type RNA
 
Source name cord blood
Organism Homo sapiens
Characteristics CD34+ cells isolated from umbilical cord blood
Extracted molecule total RNA
Extraction protocol RNeasy Mini Kit
Label Biotin/Streptavidin Phycoerythrin
Label protocol Affymetrix GeneChip Eukaryotic Small Sample Target Labeling Assay Version II, starting the first amplification cycle with 100ng total RNA
 
Hybridization protocol Standard Affymetrix hybridization protocol for eucaryotic samples
Scan protocol Affymetrix standard procedure
Description further details in Oswald et al. " Gene expression profiling of CD34+ hematopoietic cells expanded in a collagen I matrix"
Data processing Affymetrix MAS 5.0, global scaling strategy, TGT 500
 
Submission date Jul 26, 2005
Last update date Sep 21, 2005
Contact name Martin Bornhaeuser
E-mail(s) martin.bornhaeuser@uniklinikum-dresden.de
Phone ++49-351-458-4704
Fax ++49-351-458-5389
Organization name Universitätsklinikum Carl Gustav Carus
Department Med. Klinik und Poliklinik
Street address Fetscherstrasse 74
City Dresden
ZIP/Postal code 01307
Country Germany
 
Platform ID GPL96
Series (1)
GSE3003 Gene expression profiling of CD34+ hematopoietic cells expanded in a collagen I matrix

Data table header descriptions
ID_REF
VALUE
ABS_CALL
DETECTION P-VALUE

Data table
ID_REF VALUE ABS_CALL DETECTION P-VALUE
AFFX-BioB-5_at 230.7 P 0.005565
AFFX-BioB-M_at 376 P 0.00007
AFFX-BioB-3_at 162.7 P 0.000662
AFFX-BioC-5_at 561.1 P 0.000147
AFFX-BioC-3_at 488.8 P 0.000147
AFFX-BioDn-5_at 483.8 P 0.00011
AFFX-BioDn-3_at 2985.7 P 0.000169
AFFX-CreX-5_at 4989.3 P 0.000044
AFFX-CreX-3_at 7883.1 P 0.000044
AFFX-DapX-5_at 17 A 0.300606
AFFX-DapX-M_at 33.9 A 0.185131
AFFX-DapX-3_at 4.6 A 0.9273
AFFX-LysX-5_at 4.1 A 0.824672
AFFX-LysX-M_at 3.8 A 0.904333
AFFX-LysX-3_at 16.1 A 0.195266
AFFX-PheX-5_at 4.4 A 0.916408
AFFX-PheX-M_at 2.1 A 0.963431
AFFX-PheX-3_at 15.3 A 0.52976
AFFX-ThrX-5_at 7.1 A 0.860518
AFFX-ThrX-M_at 18.7 A 0.48511

Total number of rows: 22283

Table truncated, full table size 591 Kbytes.




Supplementary data files not provided

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