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Sample GSM6603344 Query DataSets for GSM6603344
Status Public on Aug 08, 2023
Title PERU1050
Sample type genomic
 
Source name Blood
Organism Homo sapiens
Characteristics sample type: Carrier
gender: Male
age: 43
mutation type: Heterozygous
mutation: p.Thr72Cysfs*2
Extracted molecule genomic DNA
Extraction protocol Standard Illumina Protocol
Label Unaffected father of PERU1010
Label protocol Standard Illumina Protocol
 
Hybridization protocol bisulfite converted DNA was amplified, fragmented and hybridised to IIllumina Infinium EPIC Human Methylation Beadchip using standard Illumina protocol
Scan protocol Arrays were imaged using BeadArray Reader using standard recommended Illumina scanner setting
Data processing Standard Illumina Protocol
 
Submission date Sep 27, 2022
Last update date Aug 08, 2023
Contact name Nady el Hajj
E-mail(s) nelhajj@hbku.edu.qa
Organization name Hamad Bin Khalifa university
Street address Education City
City Doha
ZIP/Postal code 34110
Country Qatar
 
Platform ID GPL21145
Series (1)
GSE214297 Accelerated Epigenetic Aging and DNA Methylation Alterations in Berardinelli-Seip Congenital Lipodystrophy

Data table header descriptions
ID_REF
VALUE Average Beta value

Data table
ID_REF VALUE
cg00000029 0.489987724
cg00000109 0.796239032
cg00000165 0.131228046
cg00000221 0.727528383
cg00000236 0.680460427
cg00000289 0.751591759
cg00000363 0.311375556
cg00000540 0.752153083
cg00000579 0.896878447
cg00000622 0.032759459
cg00000658 0.720891339
cg00000714 0.204030073
cg00000721 0.886316914
cg00000734 0.072175414
cg00000765 0.857760373
cg00000769 0.058154064
cg00000905 0.077499643
cg00000924 0.389183217
cg00000948 0.782993264
cg00000974 0.058708141

Total number of rows: 518474

Table truncated, full table size 11554 Kbytes.




Supplementary file Size Download File type/resource
GSM6603344_205437190157_R01C01_Grn.idat.gz 7.0 Mb (ftp)(http) IDAT
GSM6603344_205437190157_R01C01_Red.idat.gz 7.1 Mb (ftp)(http) IDAT
Processed data included within Sample table

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