|
Status |
Public on Apr 30, 2023 |
Title |
hiPSC-EC3, SUN, 72Hr [SUN 3] |
Sample type |
SRA |
|
|
Source name |
Cell line
|
Organism |
Homo sapiens |
Characteristics |
tissue: Cell line cell line: iPSC-EC cell type: Endothelial Cell genotype: SUN 3 treatment: SUN time: 72 hours
|
Extracted molecule |
total RNA |
Extraction protocol |
Cells were lysed in Trizol, and total RNA extracts were isolated and submitted for sequencing. Prepared according to manufactures specificaitons
|
|
|
Library strategy |
RNA-Seq |
Library source |
transcriptomic |
Library selection |
cDNA |
Instrument model |
Illumina HiSeq 2500 |
|
|
Description |
sample6
|
Data processing |
Raw Fastq files were uploaded to the cloud based analysis suite, BioJupies, and analyzed using the default parameters Assembly: not provided Supplementary files format and content: Raw read counts in processed data file are listed in a tab delimited .txt file
|
|
|
Submission date |
Oct 24, 2022 |
Last update date |
Apr 30, 2023 |
Contact name |
Jordan Jousma |
E-mail(s) |
jjousm2@uic.edu
|
Organization name |
University of Illinois
|
Department |
Pharmacology and Regenerative Medicine
|
Street address |
909 South Wolcott
|
City |
Chicago |
State/province |
Illinois |
ZIP/Postal code |
60612 |
Country |
USA |
|
|
Platform ID |
GPL16791 |
Series (2) |
GSE216452 |
Modulation of lncRNA links endothelial glycocalyx to vascular dysfunction of tyrosine kinase inhibitors [dataset 1] |
GSE216454 |
Modulation of lncRNA links endothelial glycocalyx to vascular dysfunction of tyrosine kinase inhibitors. |
|
Relations |
BioSample |
SAMN31429315 |
SRA |
SRX18007312 |