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Sample GSM6674186 Query DataSets for GSM6674186
Status Public on Apr 30, 2023
Title hiPSC-EC3, SUN, 72Hr [SUN 3]
Sample type SRA
 
Source name Cell line
Organism Homo sapiens
Characteristics tissue: Cell line
cell line: iPSC-EC
cell type: Endothelial Cell
genotype: SUN 3
treatment: SUN
time: 72 hours
Extracted molecule total RNA
Extraction protocol Cells were lysed in Trizol, and total RNA extracts were isolated and submitted for sequencing.
Prepared according to manufactures specificaitons
 
Library strategy RNA-Seq
Library source transcriptomic
Library selection cDNA
Instrument model Illumina HiSeq 2500
 
Description sample6
Data processing Raw Fastq files were uploaded to the cloud based analysis suite, BioJupies, and analyzed using the default parameters
Assembly: not provided
Supplementary files format and content: Raw read counts in processed data file are listed in a tab delimited .txt file
 
Submission date Oct 24, 2022
Last update date Apr 30, 2023
Contact name Jordan Jousma
E-mail(s) jjousm2@uic.edu
Organization name University of Illinois
Department Pharmacology and Regenerative Medicine
Street address 909 South Wolcott
City Chicago
State/province Illinois
ZIP/Postal code 60612
Country USA
 
Platform ID GPL16791
Series (2)
GSE216452 Modulation of lncRNA links endothelial glycocalyx to vascular dysfunction of tyrosine kinase inhibitors [dataset 1]
GSE216454 Modulation of lncRNA links endothelial glycocalyx to vascular dysfunction of tyrosine kinase inhibitors.
Relations
BioSample SAMN31429315
SRA SRX18007312

Supplementary data files not provided
SRA Run SelectorHelp
Raw data are available in SRA
Processed data are available on Series record

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