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Sample GSM6809914 Query DataSets for GSM6809914
Status Public on Apr 25, 2023
Title 205291550049_R04C01
Sample type genomic
 
Source name mice treated with guadecitabine
Organism Mus musculus
Characteristics tissue: melanoma
sample id: S6
Extracted molecule genomic DNA
Extraction protocol genomic DNA was extracted and purified from mice samples using Qiagen DNeasy Kit according to standard instructions
Label Cy5 and Cy3
Label protocol Standard Illumina Protocol
 
Hybridization protocol bisulphite converted DNA was amplified, fragmented and hybridised to Illumina Infinium MouseMethylation array (MouseMethylation-12v1-0_A2) BeadChip using standard Illumina protocol
Scan protocol Arrays were imaged using the HiScan SQ platform using standard recommended Illumina scanner setting
Description Genomic DNA from Mice
205291550049_R04C01_Grn.idat
205291550049_R04C01_Red.idat
Data processing Genome Studio v1 Software
 
Submission date Dec 12, 2022
Last update date Apr 25, 2023
Contact name Fabio Sallustio
E-mail(s) f.sallustio@nephro.uniba.it
Organization name University of Bari
Street address Piazza G. Cesare N°11
City Bari
State/province Bari
ZIP/Postal code 70124
Country Italy
 
Platform ID GPL32685
Series (1)
GSE220698 Guadecitabine increases response to combined anti-CTLA-4 and anti-PD-1 treatment in mouse melanoma in vivo by controlling the responses of T-cells, myeloid derived suppressor cells and NK cells

Data table header descriptions
ID_REF
VALUE Average Beta
205291550049_R04C01.Detection Pval

Data table
ID_REF VALUE 205291550049_R04C01.Detection Pval
cg00101675_BC21 0.7835897 0
cg00116289_BC21 0.7097107 0
cg00211372_TC21 0.5652174 0.0025
cg00531009_BC21 0.849359 0
cg00747726_TC21 0.75 0
cg00896209_TC21 0.8349037 0
cg00910419_BC21 0.6940639 0
cg00920372_BC21 0.8171661 0
cg01326836_BC21 0.6805838 0
cg01340195_BC21 0.6566558 0
cg01603043_TC21 0.6931702 0
cg01613817_BC11 0.4703307 0
cg01683044_BC21 0.1879607 0
cg02153806_BC21 0.8395722 0
cg02176373_BC21 0.9028366 0
cg02187860_TC21 0.5135952 0
cg02245762_BC11 0.1828704 0.0175
cg02258130_TC21 0.6888889 0
cg02380775_BC21 0.8545645 0
cg02529685_TC11 0.8075905 0

Total number of rows: 287050

Table truncated, full table size 8038 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

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