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Sample GSM687188 Query DataSets for GSM687188
Status Public on Jun 01, 2011
Title I4 hESCs biological rep 1-1 [mRNA]
Sample type RNA
 
Source name hESCs with SSEA4+
Organism Homo sapiens
Characteristics cell line: I4 hESC line
Extracted molecule total RNA
Extraction protocol Trizol extraction of total RNA was performed according to the manufacturer's instructions.
Label biotin
Label protocol Biotinylated cRNA were prepared according to the standard Illumina protocol from total RNA.
 
Hybridization protocol Following fragmentation, cRNA were hybridized for Illumina GX ref8 Array. Slides were washed and stained in the Illumina instrument.
Scan protocol Slides were scanned using Illumina BeadArray Reader scanner
Description HK_I4ESC
Gene expression data from SSEA4+ I4 hESC line
Data processing The data were analyzed with GenomeStudio using Illumina default analysis settings.
 
Submission date Mar 08, 2011
Last update date Jun 01, 2011
Contact name Jeffrey Zhao
Organization name Memorial Sloan Kettering Cancer Center
Department Genomics Core
Street address 1275 York Avenue
City New York
State/province NY
ZIP/Postal code 10065
Country USA
 
Platform ID GPL6104
Series (1)
GSE27834 miR-371-3 expression predicts neural differentiation potential in human pluripotent stem cells

Data table header descriptions
ID_REF
VALUE normalized signal (AVG)

Data table
ID_REF VALUE
ILMN_1709880 17510.5
ILMN_1656791 30093
ILMN_1762168 28385.8
ILMN_1750507 26892.8
ILMN_1670633 27417.3
ILMN_1810810 27781.7
ILMN_1746516 26143.3
ILMN_1755883 24351.6
ILMN_1683271 26780
ILMN_1789614 22242.9
ILMN_1694742 28541.5
ILMN_1800261 24478.3
ILMN_1787949 24462.5
ILMN_1656082 21321.9
ILMN_1772132 24149.4
ILMN_1690494 27779.7
ILMN_1764721 22510.9
ILMN_1651850 26060.6
ILMN_1710159 23292.3
ILMN_1754195 22841.4

Total number of rows: 22177

Table truncated, full table size 399 Kbytes.




Supplementary data files not provided
Processed data included within Sample table
Processed data are available on Series record

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