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Sample GSM69885 Query DataSets for GSM69885
Status Public on Oct 26, 2005
Title Methylation profiling of KRYPTONITE mutant (KYP)-1R using Msp I enzyme on spot array
Sample type genomic
 
Channel 1
Source name whole plant (5 weeks old)
Organism Arabidopsis thaliana
Characteristics Ecotype: LER
Age: 5 weeks old
Tissue: whole plant of LER wild type
Extracted molecule genomic DNA
Label cy5
 
Channel 2
Source name whole plant (5 weeks old)
Organism Arabidopsis thaliana
Characteristics Ecotype: LER
Age: 5 weeks old
Tissue: whole plant of KYP mutant
Extracted molecule genomic DNA
Label cy3
 
 
Description No additional information
Data processing Median-centered normalization of log2 ratios
 
Submission date Aug 15, 2005
Last update date Oct 26, 2005
Contact name Robert Tran
E-mail(s) rtran@fhcrc.org
Organization name Fred Hutchinson cancer research center
Street address 1100 Fairview Ave N; A1-111
City Seattle
State/province WA
ZIP/Postal code 98109
Country USA
 
Platform ID GPL2726
Series (1)
GSE3109 Chromatin and siRNA pathways cooperate to maintain DNA methylation

Data table header descriptions
ID_REF
VALUE normalized log2 ratio

Data table
ID_REF VALUE
381486.1 -0.09
381486.2 -0.07
911506.1 0.184
911506.2 0.13
2102524.1 0.156
2102524.2 0.186
2429226.1 0.0860000000000001
2429226.2 0.0580000000000001
3642086.1 -0.269
3642086.2 -0.177
3891813.1 -0.168
3891813.2 -0.176
4794374.1 -0.448
4794374.2 -0.443
5031770.1 -0.11
5031770.2 -0.037
5627643.1 0.162
5627643.2 0.1
6055621.1 -0.148
6055621.2 -0.253

Total number of rows: 1932

Table truncated, full table size 34 Kbytes.




Supplementary data files not provided

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