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GEO accession:
Sample GSM714947
Query DataSets for GSM714947
Status
Public on Apr 27, 2011
Title
hni9_LN_3
Sample type
RNA
Source name
Roots, hni9, LN
Organism
Arabidopsis thaliana
Characteristics
tissue: roots
genotype: hni9
environment: low nitrogen
Treatment protocol
Steady state on 0.3 mM KNO3 (low nitrogen) or 10 mM NH4NO3 (high nitrogen).
Growth protocol
Plants were grown on basal media supplemented by different nitrogen sources.
Extracted molecule
total RNA
Extraction protocol
Trizol RNA.
Label
Biotin
Label protocol
Affymetrix recommendations.
Hybridization protocol
Affymetrix recommendations.
Scan protocol
Affymetrix recommendations.
Data processing
Mas5 [R]
Submission date
Apr 27, 2011
Last update date
Aug 15, 2018
Contact name
Gabriel Krouk
Organization name
CNRS
Department
Biology
Lab
B&PMP
Street address
2 Place Pierre Viala
City
Montpellier
ZIP/Postal code
34060
Country
France
Platform ID
GPL198
Series (1)
GSE24738
HNI9/IWS1 mutant transcriptome in nitrogen-contrasted environments
Relations
Reanalyzed by
GSE118579
Data table header descriptions
ID_REF
VALUE
MAS5.0 signal intensity
Data table
ID_REF
VALUE
244901_at
156.8681155
244902_at
131.7489631
244903_at
245.1046784
244904_at
17.14766812
244905_at
19.26771984
244906_at
145.0495884
244907_at
24.83671892
244908_at
2.884379608
244909_at
6.042559832
244910_s_at
30.40377918
244911_at
18.26217419
244912_at
2348.359782
244913_at
13.88509438
244914_at
17.75647775
244915_s_at
6.837156864
244916_at
24.04266172
244917_at
4.4375692
244918_at
8.315073407
244919_at
18.57847809
244920_s_at
393.0976901
Total number of rows:
22810
Table truncated, full table size
490 Kbytes
.
Supplementary file
Size
Download
File type/resource
GSM714947.CEL.gz
2.1 Mb
(ftp)
(http)
CEL
Processed data included within Sample table
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