NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Sample GSM723165 Query DataSets for GSM723165
Status Public on Sep 16, 2012
Title NSCLC 4
Sample type RNA
 
Source name lung
Organism Homo sapiens
Characteristics gender: male
disease state: NSCLC
nsclc type: adenocarcinoma
tissue: cancer
tnm: /2/3/0/
Treatment protocol none
Growth protocol none
Extracted molecule total RNA
Extraction protocol RNA was extracted with Trizol reagent, followed by QIAGEN RNeasy mini kit in accordance with the prescribed protocol provided with the kit. Quality control was performed with 1% agrose electrophoresis .
Label biotin
Label protocol Biotinylated cRNA were prepared with the Ambion MessageAmp kit for Illumina arrays
 
Hybridization protocol Standard Illumina hybridization protocol
Scan protocol Standard Illumina scanning protocol
Description SAMPLE 7
replicate 1
Data processing The data were normalised using average normalisation with Illumina Genomestudio software
 
Submission date May 12, 2011
Last update date Sep 16, 2012
Contact name lina ma
E-mail(s) malina209@163.com
Organization name Zhoushan Hospital
Street address Renmin North Road No.238
City Zhoushan
ZIP/Postal code 316004
Country China
 
Platform ID GPL10558
Series (2)
GSE29249 Genome-wide analysis of gene expression in Non-small Cell Lung Cancer
GSE29250 An Integrated Analysis of miRNA and mRNA Expressions of Non-small Cell Lung Cancer

Data table header descriptions
ID_REF
VALUE average normalized signal
Detection Pval

Data table
ID_REF VALUE Detection Pval
ILMN_1762337 119.427 0
ILMN_2055271 -17.85539 0.6805195
ILMN_1736007 9.624122 0.4376623
ILMN_2383229 7.409531 0.4701299
ILMN_1806310 2.71928 0.5194805
ILMN_1779670 -27.14867 0.7415584
ILMN_1653355 9.838058 0.4324675
ILMN_1717783 -44.0453 0.874026
ILMN_1705025 42.20513 0.08831169
ILMN_1814316 24.02143 0.2532468
ILMN_2359168 -31.04187 0.774026
ILMN_1731507 -40.61086 0.8532467
ILMN_1787689 2.692074 0.5194805
ILMN_3241953 11.35566 0.4103896
ILMN_1745607 1638.037 0
ILMN_2136495 -55.69164 0.9701298
ILMN_1668111 30.96794 0.1779221
ILMN_2295559 19.05025 0.3233766
ILMN_1735045 -9.587919 0.612987
ILMN_1680754 -20.69827 0.7

Total number of rows: 47225

Table truncated, full table size 1387 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap