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Sample GSM769064 Query DataSets for GSM769064
Status Public on Oct 19, 2011
Title F4 +/+ (from +/+) #3
Sample type RNA
 
Source name whole worm L3 lysates
Organism Caenorhabditis elegans
Characteristics genotype/variation: +/+ (from +/+)
generation: F4
day of birth: day1
Treatment protocol Worms were washed several times with M9 buffer prior to extraction
Growth protocol Worms were grown at 20 degrees
Extracted molecule total RNA
Extraction protocol RNAqueous kit (Ambion) was used
Label biotin
Label protocol Labeling was performed at the Stanford Protein and Nucleic Acid facility using biotin
 
Hybridization protocol Affymetrix protocol was followed by Stanford Protein and Nucleic Acid facility
Scan protocol Again scanning was performed according to affymetrix protocol by Stanford Protein and Nucleic Acid facility
Description F4 +/+ (from +/+) #3
Data processing Background adjustment and normalization was performed with RMA (Robust Multiarray Analysis) in R
 
Submission date Jul 29, 2011
Last update date Oct 19, 2011
Contact name Eric Lieberman Greer
E-mail(s) eric.greer@childrens.harvard.edu
Organization name Stanford University
Department Genetics
Lab Anne Brunet
Street address Alway M314 300 Pasteur Drive
City Palo Alto
State/province CA
ZIP/Postal code 94305
Country USA
 
Platform ID GPL13995
Series (1)
GSE31043 Transgenerational epigenetic inheritance of longevity in Caenorhabditis elegans

Data table header descriptions
ID_REF
VALUE Signals presented are RMA-normalized and log2 transformed

Data table
ID_REF VALUE
NM_001025782_at 7.755409728
NM_001025783_at 7.755409728
NM_001025786_at 5.88045477
NM_001025787_at 7.484140226
NM_001025789_at 3.235275274
NM_001025790_at 3.235275274
NM_001025791_at 5.896384555
NM_001025792_at 6.228708709
NM_001025793_at 5.101649746
NM_001025794_at 3.30329718
NM_001025795_at 3.30329718
NM_001025801_at 8.065673365
NM_001025802_at 7.987260484
NM_001025804_at 4.291895654
NM_001025805_at 5.843154947
NM_001025806_at 4.291895654
NM_001025808_at 6.081797879
NM_001025809_at 6.081797879
NM_001025812_at 3.925739483
NM_001025813_at 4.052078824

Total number of rows: 20806

Table truncated, full table size 516 Kbytes.




Supplementary file Size Download File type/resource
GSM769064.CEL.gz 1.9 Mb (ftp)(http) CEL
Processed data included within Sample table
Processed data are available on Series record

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