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Sample GSM7701520 Query DataSets for GSM7701520
Status Public on Nov 22, 2023
Title 143B
Sample type genomic
 
Source name ostosarcoma cell line
Organism Homo sapiens
Characteristics cell line: 143B
cell type: ostosarcoma cell line
Extracted molecule genomic DNA
Extraction protocol DNA was extracted using the Blood and Cell Culture DNA Midi Kit (Qiagen, Hilden, Germany)
Label biotin
Label protocol Samples were prepared and hybridized to the CytoScan HD Assay (Affymetrix, Santa Clara, CA, USA) according to Affymetrix specifications.
 
Hybridization protocol Samples were prepared and hybridized to the CytoScan HD Assay (Affymetrix, Santa Clara, CA, USA) according to Affymetrix specifications.
Scan protocol standard protocol
Data processing The data generated from the assay were normalized, copy number status calculated, and the data reviewed for quality using the Chromosome Analysis Suite (ChAS) v3.0 (Thermo Fisher Scientific, Waltham, MA).
The resulting cychp files are generated by the Affymetrix Chromosome Analysis Suite (ChAS) v3.0
 
Submission date Aug 10, 2023
Last update date Nov 22, 2023
Contact name Chia-Ho Cheng
E-mail(s) chia-ho.cheng@moffitt.org
Organization name Moffitt Cancer Center
Street address 12902 USF Magnolia Drive
City Tampa
ZIP/Postal code 33647
Country USA
 
Platform ID GPL16131
Series (1)
GSE240546 Comparison of CNV in 6 ostosarcoma cell lines

Supplementary file Size Download File type/resource
GSM7701520_143B_CytoScanHD_Array_.CEL.gz 30.6 Mb (ftp)(http) CEL
GSM7701520_143B_CytoScanHD_Array_.cyhd.ND.cychp.gz 95.8 Mb (ftp)(http) CYCHP
GSM7701520_143B_CytoScanHD_Array_.cyhd.cychp.gz 95.8 Mb (ftp)(http) CYCHP
Processed data provided as supplementary file

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