|
| Status |
Public on May 08, 2024 |
| Title |
CByB6F1 BMF untreated-3 |
| Sample type |
SRA |
| |
|
| Source name |
Mouse Bone Marrow
|
| Organism |
Mus musculus |
| Characteristics |
Sex: Female
age: 2-5 months
subject: pool3-untreated
treatment: untreated
tissue: bone marrow
cell type: CD8
|
| Extracted molecule |
total RNA |
| Extraction protocol |
Libraries were generted using SMART-Seq mRNA LP Kit (Takara).
|
| |
|
| Library strategy |
RNA-Seq |
| Library source |
transcriptomic |
| Library selection |
cDNA |
| Instrument model |
Illumina NovaSeq 6000 |
| |
|
| Description |
XF-8569-3
readcounts.txt
|
| Data processing |
Paired-end reads were aligned to the reference genome mm10 using STAR
featureCounts was used to count the reads numbers mapped to each gene with UCSC annotation.
Assembly: mm10
Supplementary files format and content: readcounts.txt
|
| |
|
| Submission date |
Aug 15, 2023 |
| Last update date |
May 08, 2024 |
| Contact name |
Shouguo Gao |
| E-mail(s) |
gaos2@nih.gov
|
| Phone |
3014029014
|
| Organization name |
National Institutes of Health
|
| Department |
NHLBI
|
| Lab |
Hematology Branch
|
| Street address |
9000 Rockville Pike
|
| City |
Bethesda |
| State/province |
MD |
| ZIP/Postal code |
20892 |
| Country |
USA |
| |
|
| Platform ID |
GPL24247 |
| Series (2) |
| GSE240864 |
Low dose ruxolitinib plus cyclosporine to treat murine immune-mediated bone marrow failure |
| GSE240867 |
Combination therapy with low dose ruxolitinib and cyclosporine in murine immune bone marrow failure |
|
| Relations |
| BioSample |
SAMN36994126 |
| SRA |
SRX21371834 |
